write_tool
Save AnnData objects to file with configurable formats and compression for single-cell RNA sequencing analysis workflows.
Instructions
Write AnnData objects to file.
Input Schema
TableJSON Schema
| Name | Required | Description | Default |
|---|---|---|---|
| filename | Yes | Path to save the file. If no extension is provided, the default format will be used. | |
| ext | No | File extension to infer file format. If None, defaults to scanpy's settings.file_format_data. | |
| compression | No | Compression format for h5 files. | gzip |
| compression_opts | No | Compression options for h5 files. |