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util_rainbow

Color protein residues in a rainbow gradient from N to C terminus to visualize sequence position in the structure.

Instructions

Colors residues in rainbow from N to C terminus

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
selectionNoWhat to recolour. Defaults to everything.all

Output Schema

TableJSON Schema
NameRequiredDescriptionDefault
resultYes
Behavior3/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

With no annotations, the description carries the full burden. It discloses the core behavior (rainbow coloring by sequence position) but does not mention side effects like overwriting existing colors, how the selection parameter modifies scope, or whether the change is reversible. It is not misleading but lacks behavioral depth.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is a single, front-loaded sentence with no wasted words. Every part contributes to understanding the tool's action and scheme.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness4/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a simple one-parameter utility with schema coverage and an output schema, the description is largely sufficient. It lacks usage guidance and alternative differentiation, but is otherwise complete for the tool's simplicity.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The input schema already provides a description for the single 'selection' parameter, and coverage is 100%. The tool description adds no additional parameter-level meaning, so the baseline score of 3 is appropriate.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description uses a specific verb ('colors'), resource ('residues'), and method ('rainbow from N to C terminus'), clearly distinguishing it from siblings like util_chainbow or spectrum. It precisely communicates the tool's purpose.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance is provided on when to use this tool versus alternative coloring utilities. There is no mention of alternatives, exclusions, or the context in which this coloring scheme is preferred, leaving the agent to infer usage.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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