putty_view
Visualize protein flexibility by mapping crystallographic B-factors to cartoon tube thickness and color, with a transparent surface and ligand sticks.
Instructions
Visualizes protein flexibility using a putty (tube-width) representation.
The cartoon tube radius scales linearly with crystallographic B-factor: thin/blue = rigid/ordered regions, thick/red = flexible/disordered regions. A 70%-transparent surface is shown, also colored by B-factor. Organic ligands are shown as sticks with yellow carbons. Black background.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| obj_name | Yes | PyMOL object name (e.g. "1abc") |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
| result | Yes |