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search_omim

Search OMIM for genetic diseases and phenotypes using a gene symbol or disease name. Retrieve curated entries from the Online Mendelian Inheritance in Man database.

Instructions

Search OMIM (Online Mendelian Inheritance in Man) for genetic diseases and phenotypes.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
queryYesGene symbol or disease name
limitNoMaximum results (default: 10)
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations provided, and the description fails to disclose behavioral traits like whether it is read-only, what fields are returned, or if there are any side effects. The description is too minimal to inform the agent of tool behavior beyond the basic function.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Single sentence, no wasted words. Information is front-loaded and clear for its brevity.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

The tool lacks an output schema, so the description should explain what results look like (e.g., list of OMIM entries). It does not. Also, with many sibling search tools, more context on OMIM's unique value would improve completeness.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 100% (both query and limit described). The description adds no extra meaning beyond the schema; it does not explain default behavior for limit or accepted formats for query.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

Description clearly states the tool searches OMIM for genetic diseases and phenotypes, using a specific verb and resource. It distinguishes itself from sibling search tools like search_clinvar or search_ensembl_gene by naming the target database.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance on when to use this tool versus alternatives such as search_clinvar or get_gene_diseases. The description does not mention any prerequisites, exclusions, or context for usage.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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