wes_run_workflow
Submit a workflow run to the WES service by specifying workflow URL, type, version, and optional parameters. Supports CWL/WDL workflows.
Instructions
Submit a new workflow run to the WES service.
Args: workflow_url: URL or relative path to the workflow definition (CWL/WDL) workflow_type: Workflow language type (e.g., "CWL", "WDL") workflow_type_version: Version of the workflow language (e.g., "v1.0") workflow_params: Input parameters for the workflow (JSON object) workflow_engine: Workflow engine to use (e.g., "cromwell", "toil") workflow_engine_version: Version of the workflow engine workflow_engine_parameters: Additional engine-specific parameters tags: Arbitrary key-value tags for the run
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| tags | No | ||
| workflow_url | Yes | ||
| workflow_type | Yes | ||
| workflow_engine | No | ||
| workflow_params | No | ||
| workflow_type_version | Yes | ||
| workflow_engine_version | No | ||
| workflow_engine_parameters | No |