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NGS360

NGS360 MCP Server

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by NGS360

get_samples_for_run

Retrieve the list of samples associated with a specified sequencing run using its run identifier.

Instructions

List sample associations for a sequencing run.

Args: run_id: The run identifier

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
run_idYes
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations provided, so the description carries full burden. It only states 'list' but does not disclose if it is read-only, any side effects, pagination, or output format.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Extremely concise with one sentence and an argument list. Every part is efficient.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness3/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a simple list tool with one parameter, it is fairly complete but lacks hints about output (e.g., returns list of samples) or potential pagination. No output schema exists.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters2/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 0%, so description must compensate. It adds 'The run identifier' which adds minimal meaning beyond the schema's type and title.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the verb 'List' and resource 'sample associations for a sequencing run', distinguishing it from sibling tools like 'associate_sample_with_run' or 'clear_samples_for_run' which modify associations.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance on when to use this tool versus alternatives. For example, it does not mention that this is for viewing, while other tools handle adding or removing samples.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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