TogoMCP

PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> PREFIX owl: <http://www.w3.org/2002/07/owl#> PREFIX xsd: <http://www.w3.org/2001/XMLSchema#> PREFIX dct: <http://purl.org/dc/terms/> PREFIX obo: <http://purl.obolibrary.org/obo/> PREFIX xsi: <http://www.w3.org/2001/XMLSchema-instance> PREFIX pdbx: <http://pdbml.pdb.org/schema/pdbx-v50.xsd> PREFIX pdbo: <https://rdf.wwpdb.org/schema/pdbx-v50.owl#> PREFIX dc: <http://purl.org/dc/elements/1.1/> PREFIX skos: <http://www.w3.org/2004/02/skos/core#> PREFIX pdb: <https://rdf.wwpdb.org/pdb/> <PDBShape> { a [ pdbo:datablock ] ; dc:title xsd:string ; dct:identifier xsd:string ; rdfs:seeAlso IRI ; rdfs:seeAlso IRI ; rdfs:seeAlso IRI ; pdbo:databalockName xsd:string ; pdbo:has_entityCategory @<EntityCategoryShape> ; pdbo:has_struct_confCategory @<StructConfCategoryShape> * ; pdbo:has_struct_sheetCategory @<StructSheetCategoryShape> * ; pdbo:has_exptlCategory @<ExptlCategoryShape> ; pdbo:has_pdbx_struct_assemblyCategory @<AssemblyCategoryShape> } <EntityCategoryShape> { a [ pdbo:entityCategory ] ; pdbo:has_entity @<EntityShape> } <EntityShape> { a [ pdbo:entity ] ; pdbo:entity.formula_weight xsd:string ; pdbo:entity.id xsd:string ; pdbo:entity.pdbx_description xsd:string ; pdbo:entity.pdbx_fragment xsd:string ; pdbo:entity.pdbx_number_of_molecules xsd:string ; pdbo:entity.src_method xsd:string ; pdbo:entity.type xsd:string ; pdbo:referenced_by_entity_poly @<EntityPolyShape> * ; pdbo:referenced_by_entity_src_gen @<EntitySrcGenShape> ; pdbo:referenced_by_struct_ref @<StructRefShape> ; pdbo:referenced_by_struct_asym BNode } <EntityPolyShape> { a [ pdbo:entity_poly ] ; pdbo:entity_poly.type xsd:string ; pdbo:entity_poly.pdbx_seq_one_letter_code xsd:string ; pdbo:entity_poly.pdbx_seq_one_letter_code_can xsd:string ; pdbo:referenced_by_entity_poly_seq @<PDBxPolySeqSchemeShape> } <PDBxPolySeqSchemeShape> { a [ pdbo:pdbx_poly_seq_scheme ] ; pdbo:reference_to_entity_poly_seq BNode } <ChemCompShape> { a [ pdbo:chem_comp <https://rdf.wwpdb.org/pdb/5KE7/chem_comp/ALA> ] ; pdbo:chem_comp.formula xsd:string ; pdbo:chem_comp.formula_weight xsd:string ; pdbo:chem_comp.id xsd:string ; pdbo:chem_comp.name xsd:string ; pdbo:chem_comp.type xsd:string ; pdbo:link_to_chem_comp IRI } <EntitySrcGenShape> { a [ pdbo:entity_src_gen ] ; rdfs:seeAlso IRI ; pdbo:link_to_taxonomy_source IRI ; pdbo:entity_src_gen.gene_src_common_name xsd:string ; pdbo:entity_src_gen.pdbx_gene_src_scientific_name xsd:string ; pdbo:link_to_taxonomy_host IRI ; pdbo:entity_src_gen.pdbx_host_org_scientific_name xsd:string ; pdbo:entity_src_gen.pdbx_host_org_strain xsd:string ; pdbo:entity_src_gen.pdbx_host_org_vector_type xsd:string ; pdbo:entity_src_gen.pdbx_seq_type xsd:string } <StructRefShape> { a [ pdbo:struct_ref ] ; rdfs:seeAlso IRI ; pdbo:link_to_uniprot IRI ; pdbo:struct_ref.pdbx_align_begin xsd:string ; pdbo:struct_ref.pdbx_seq_one_letter_code xsd:string } <StructConfCategoryShape> { a [ pdbo:struct_confCategory ] ; pdbo:has_struct_conf @<ConformationShape> } <ConformationShape> { a [ pdbo:struct_conf ] ; pdbo:struct_conf.conf_type_id xsd:string ; pdbo:struct_conf.beg_label_asym_id xsd:string ; pdbo:struct_conf.beg_label_comp_id xsd:string ; pdbo:struct_conf.beg_label_seq_id xsd:string ; pdbo:struct_conf.end_label_asym_id xsd:string ; pdbo:struct_conf.end_label_comp_id xsd:string ; pdbo:struct_conf.end_label_seq_id xsd:string ; pdbo:struct_conf.id xsd:string ; pdbo:struct_conf.pdbx_PDB_helix_id xsd:string ; pdbo:struct_conf.pdbx_PDB_helix_length xsd:string * ; pdbo:struct_conf.pdbx_PDB_helix_class xsd:string * ; pdbo:struct_conf.details xsd:string * } <StructSheetCategoryShape> { a [ pdbo:struct_sheetCategory ] ; pdbo:has_struct_sheet @<SheetShape> } <SheetShape> { a [ pdbo:struct_sheet ] ; pdbo:struct_sheet.id xsd:string ; pdbo:struct_sheet.number_strands xsd:string ; pdbo:referenced_by_struct_sheet_range @<SheetStrandShape> + } <SheetStrandShape> { a [ pdbo:struct_sheet_range ] ; pdbo:struct_sheet_range.id xsd:string ; pdbo:struct_sheet_range.beg_label_asym_id xsd:string ; pdbo:struct_sheet_range.beg_label_comp_id xsd:string ; pdbo:struct_sheet_range.beg_label_seq_id xsd:string ; pdbo:struct_sheet_range.end_label_asym_id xsd:string ; pdbo:struct_sheet_range.end_label_comp_id xsd:string ; pdbo:struct_sheet_range.end_label_seq_id xsd:string } <ExptlCategoryShape> { a [ pdbo:exptlCategory ] ; pdbo:has_exptl BNode } <AssemblyCategoryShape> { a [ pdbo:pdbx_struct_assemblyCategory ] ; pdbo:has_pdbx_struct_assembly @<AssemblyShape> } <AssemblyShape> { a [ pdbo:pdbx_struct_assembly ] ; pdbo:pdbx_struct_assembly.id xsd:string ; pdbo:pdbx_struct_assembly.oligomeric_count xsd:string ; pdbo:pdbx_struct_assembly.oligomeric_details xsd:string }