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PREFIX owl: <http://www.w3.org/2002/07/owl#> PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> PREFIX dcterms: <http://purl.org/dc/terms/> PREFIX vocab: <http://rdf.ncbi.nlm.nih.gov/pubchem/vocabulary#> PREFIX bao: <http://www.bioassayontology.org/bao#> PREFIX bioassay: <http://rdf.ncbi.nlm.nih.gov/pubchem/bioassay/> PREFIX source: <http://rdf.ncbi.nlm.nih.gov/pubchem/source/> PREFIX taxonomy: <http://rdf.ncbi.nlm.nih.gov/pubchem/taxonomy/> PREFIX measuregroup: <http://rdf.ncbi.nlm.nih.gov/pubchem/measuregroup/> PREFIX endpoint: <http://rdf.ncbi.nlm.nih.gov/pubchem/endpoint/> PREFIX protein: <http://rdf.ncbi.nlm.nih.gov/pubchem/protein/> PREFIX substance: <http://rdf.ncbi.nlm.nih.gov/pubchem/substance/> PREFIX compound: <http://rdf.ncbi.nlm.nih.gov/pubchem/compound/> PREFIX reference: <http://rdf.ncbi.nlm.nih.gov/pubchem/reference/> PREFIX patent: <http://rdf.ncbi.nlm.nih.gov/pubchem/patent/> PREFIX patentassignee: <http://rdf.ncbi.nlm.nih.gov/pubchem/patentassignee/> PREFIX patentcpc: <http://rdf.ncbi.nlm.nih.gov/pubchem/patentcpc/> PREFIX patentipc: <http://rdf.ncbi.nlm.nih.gov/pubchem/patentipc/> PREFIX pathway: <http://rdf.ncbi.nlm.nih.gov/pubchem/pathway/> PREFIX synonym: <http://rdf.ncbi.nlm.nih.gov/pubchem/synonym/> PREFIX concept: <http://rdf.ncbi.nlm.nih.gov/pubchem/concept/> PREFIX gene: <http://rdf.ncbi.nlm.nih.gov/pubchem/gene/> PREFIX conserveddomain: <http://rdf.ncbi.nlm.nih.gov/pubchem/conserveddomain/> PREFIX descriptor: <http://rdf.ncbi.nlm.nih.gov/pubchem/descriptor/> PREFIX inchikey: <http://rdf.ncbi.nlm.nih.gov/pubchem/inchikey> PREFIX pav: <http://purl.org/pav/> PREFIX biopax: <http://www.biopax.org/release/biopax-level3.owl#> PREFIX sio: <http://semanticscience.org/resource/> PREFIX obo: <http://purl.obolibrary.org/obo/> PREFIX cito: <http://purl.org/spar/cito/> PREFIX epo_patent: <http://data.epo.org/linked-data/def/patent/> PREFIX epo_cpc: <http://data.epo.org/linked-data/def/cpc/> PREFIX epo_ipc: <http://data.epo.org/linked-data/def/ipc/> PREFIX pdbo: <http://rdf.wwpdb.org/schema/pdbx-v40.owl#> PREFIX up: <http://purl.uniprot.org/core/> PREFIX fabio: <http://purl.org/spar/fabio/> PREFIX foaf: <http://xmlns.com/foaf/0.1/> PREFIX skos: <http://www.w3.org/2004/02/skos/core#> PREFIX chembl: <http://rdf.ebi.ac.uk/resource/chembl/molecule/> PREFIX ensembl: <http://rdf.ebi.ac.uk/resource/ensembl/> PREFIX cooccurrence: <http://rdf.ncbi.nlm.nih.gov/pubchem/cooccurrence/> PREFIX author: <http://rdf.ncbi.nlm.nih.gov/pubchem/author/> PREFIX book: <http://rdf.ncbi.nlm.nih.gov/pubchem/book/> PREFIX cell: <http://rdf.ncbi.nlm.nih.gov/pubchem/cell/> PREFIX disease: <http://rdf.ncbi.nlm.nih.gov/pubchem/disease/> PREFIX grant: <http://rdf.ncbi.nlm.nih.gov/pubchem/grant/> PREFIX journal: <http://rdf.ncbi.nlm.nih.gov/pubchem/journal/> PREFIX organization: <http://rdf.ncbi.nlm.nih.gov/pubchem/organization/> PREFIX edam: <http://edamontology.org/> PREFIX vcard2006: <http://www.w3.org/2006/vcard/ns#> PREFIX prism: <http://prismstandard.org/namespaces/basic/3.0/> PREFIX frapo: <http://purl.org/cerif/frapo/> PREFIX xsd: <http://www.w3.org/2001/XMLSchema#> <PubChemCompoundShape> { sio:SIO_000008 IRI * ; sio:CHEMINF_000461 @<PubChemCompoundShape> * ; skos:closeMatch IRI * ; vocab:is_active_ingredient_of IRI * ; sio:CHEMINF_000455 @<PubChemCompoundShape> * ; sio:CHEMINF_000480 @<PubChemCompoundShape> * ; sio:CHEMINF_000462 @<PubChemCompoundShape> * ; vocab:has_parent @<PubChemCompoundShape> * ; obo:RO_0000087 IRI ? } <PubChemSubstanceShape> { sio:SIO_000008 IRI * ; dcterms:source @<PubChemSourceShape> ; obo:RO_0000056 @<PubChemMeasureGroupShape> * ; sio:CHEMINF_000477 @<PubChemCompoundShape> * ; dcterms:available xsd:string ; cito:isDiscussedBy IRI * ; skos:exactMatch IRI * ; pdbo:link_to_pdb IRI * ; dcterms:modified xsd:string } <PubChemBioAssayShape> { a [ bao:BAO_0000015 ] ; dcterms:title xsd:string ; dcterms:source @<PubChemSourceShape> ; bao:BAO_0000209 @<PubChemMeasureGroupShape> ; bao:BAO_0000210 IRI * ; bao:BAO_0000540 @<PubChemBioAssayShape> * ; bao:BAO_0001067 @<PubChemBioAssayShape> * ; bao:BAO_0001094 @<PubChemBioAssayShape> * ; cito:isDiscussedBy @<PubChemPatentShape> * } <PubChemConceptShape> { a [ skos:Concept ] ; skos:prefLabel xsd:string * ; pav:importedFrom @<PubChemSourceShape> * ; skos:broader @<PubChemConceptShape> * ; skos:inScheme @<PubChemConceptShape> * } <PubChemConservedDomainShape> { a [ obo:SO_0000417 ] ; dcterms:title xsd:string ; dcterms:abstract xsd:string } <PubChemDescriptorShape> { a [ obo:IAO_0000129 sio:CHEMINF_000334 sio:CHEMINF_000335 sio:CHEMINF_000336 sio:CHEMINF_000337 sio:CHEMINF_000338 sio:CHEMINF_000369 sio:CHEMINF_000370 sio:CHEMINF_000371 sio:CHEMINF_000372 sio:CHEMINF_000373 sio:CHEMINF_000374 sio:CHEMINF_000375 sio:CHEMINF_000376 sio:CHEMINF_000379 sio:CHEMINF_000382 sio:CHEMINF_000387 sio:CHEMINF_000388 sio:CHEMINF_000389 sio:CHEMINF_000390 sio:CHEMINF_000391 sio:CHEMINF_000392 sio:CHEMINF_000395 sio:CHEMINF_000396 ] ; sio:SIO_000300 xsd:integer } <PubChemGeneShape> { a [ sio:SIO_010035 sio:SIO_001383 ] ; bao:BAO_0002870 IRI ; skos:prefLabel xsd:string ; skos:altLabel xsd:string * ; owl:sameAs IRI ; skos:closeMatch IRI * ; obo:RO_0000056 IRI * ; obo:RO_0000085 IRI * ; obo:RO_0001025 IRI * ; sio:SIO_000300 xsd:string * ; sio:SIO_000558 @<PubChemGeneShape> * ; up:organism @<PubChemTaxonomyShape> ; cito:isDiscussedBy @<PubChemReferenceShape> * } <PubChemEndpointShape> { a [ bao:BAO_0000034 bao:BAO_0000186 bao:BAO_0000187 bao:BAO_0000188 bao:BAO_0000189 bao:BAO_0000190 bao:BAO_0000192 bao:BAO_0000194 bao:BAO_0000349 bao:BAO_0000477 bao:BAO_0002117 bao:BAO_0002144 bao:BAO_0002145 bao:BAO_0002146 bao:BAO_0002162 bao:BAO_0002862 bao:BAO_0002877 bao:BAO_0002878 bao:BAO_0002879 bao:BAO_0002880 bao:BAO_0002881 bao:BAO_0002882 bao:BAO_0002883 bao:BAO_0002884 bao:BAO_0002886 bao:BAO_0002887 bao:BAO_0003036 ] ; obo:IAO_0000136 @<PubChemSubstanceShape> ; sio:SIO_000221 IRI ; sio:SIO_000300 xsd:float ; rdfs:label xsd:string ; vocab:PubChemAssayOutcome IRI ; cito:citesAsDataSource @<PubChemReferenceShape> } <PubChemInchiKeyShape> { a [ sio:CHEMINF_000399 ] ; sio:SIO_000300 xsd:string ; sio:SIO_000011 @<PubChemCompoundShape> ; dcterms:subject xsd:string } <PubChemPatentShape> { a [ epo_patent:Publication ] ; dcterms:abstract xsd:string ; epo_patent:classificationCPCAdditional @<PubChemPatentCPCShape> ; epo_patent:classificationIPCAdditional @<PubChemPatentIPCShape> ; epo_patent:applicantVC @<PubChemPatentAssigneeShape> ; epo_patent:inventorVC xsd:string ; epo_patent:classificationIPCInventive @<PubChemPatentIPCShape> ; epo_patent:classificationCPCInventive @<PubChemPatentCPCShape> ; cito:isCitedBy @<PubChemPatentShape> ; epo_patent:filingDate xsd:string ; epo_patent:grantDate xsd:string ; epo_patent:publicationNumber xsd:string ; vocab:priorityDate xsd:string ; epo_patent:publicationDate xsd:string ; epo_patent:titleOfInvention xsd:string } <PubChemPatentAssigneeShape> { vcard2006:fn xsd:string } <PubChemPatentCPCShape> { a [ epo_cpc:Section epo_cpc:SubSection epo_cpc:Class epo_cpc:SubClass epo_cpc:MainGroup epo_cpc:SubGroup ] ; dcterms:modified xsd:string ; dcterms:title xsd:string ; skos:broader @<PubChemPatentCPCShape> ? ; epo_cpc:concordantIPC @<PubChemPatentIPCShape> ? ; epo_cpc:level xsd:integer ; epo_cpc:symbol xsd:string } <PubChemPatentIPCShape> { owl:sameAs xsd:string ; dcterms:title xsd:string ; skos:broader @<PubChemPatentIPCShape> ? ; rdfs:label xsd:string } <PubChemMeasureGroupShape> { a [ bao:BAO_0000040 ] ; obo:OBI_0000299 @<PubChemEndpointShape> ; dcterms:title xsd:string ; obo:RO_0000057 IRI * ; dcterms:source @<PubChemSourceShape> } <PubChemPathwayShape> { a [ biopax:Pathway ] ; dcterms:title xsd:string ; up:organism @<PubChemTaxonomyShape> ; dcterms:source @<PubChemSourceShape> ; cito:isDiscussedBy @<PubChemReferenceShape> * ; obo:RO_0000057 IRI + ; biopax:pathwayComponent @<PubChemPathwayShape> + ; owl:sameAs IRI * ; skos:related @<PubChemPathwayShape> * } <PubChemProteinShape> { a [ sio:SIO_010043 ] ; skos:altLabel xsd:string * ; skos:prefLabel xsd:string ; up:organism @<PubChemTaxonomyShape> ; skos:closeMatch IRI + ; up:encodedBy @<PubChemGeneShape> ; vocab:hasSimilarProtein @<PubChemProteinShape> * ; obo:RO_0002180 @<PubChemConservedDomainShape> * ; obo:RO_0002180 IRI * ; pdbo:link_to_pdb IRI * ; bao:BAO_0002817 xsd:string ; up:enzyme @<PubChemEnzymeShape> ? ; owl:sameAs IRI * } <PubChemEnzymeShape> { a [ up:Enzyme sio:SIO_010343 ] ; rdfs:subClassOf @<PubChemEnzymeShape> ; skos:altLabel xsd:string * ; skos:prefLabel xsd:string ; owl:sameAs IRI } <PubChemReferenceShape> { prism:contentType xsd:string ; dcterms:title xsd:string ; cito:discusses IRI * ; dcterms:bibliographicCitation xsd:string ; dcterms:date xsd:string ; dcterms:creator @<PubChemAuthorShape> ; fabio:hasSubjectTerm IRI * ; fabio:hasPrimarySubjectTerm IRI * ; vocab:discussesAsDerivedByTextMining IRI * ; prism:startingPage xsd:string ; prism:endingPage xsd:string ; prism:pageRange xsd:string ; frapo:hasFundingAgency @<PubChemOrganizationShape> ; frapo:isSupportedBy @<PubChemGrantShape> ; dcterms:identifier IRI ; prism:issn xsd:string ; prism:issueIdentifier xsd:string ; dcterms:isPartOf IRI ; dcterms:language xsd:string ; prism:publicationName xsd:string ; dcterms:source IRI } <PubChemSourceShape> { a [ dcterms:Dataset ] ; dcterms:title xsd:string ; dcterms:alternative xsd:string ; dcterms:subject @<PubChemConceptShape> * ; foaf:homepage IRI ; dcterms:license IRI ; dcterms:rights xsd:string } <PubChemTaxonomyShape> { a [ sio:SIO_010000 ] ; skos:prefLabel xsd:string ; skos:altLabel xsd:string * ; skos:closeMatch IRI * ; cito:isDiscussedBy IRI * ; owl:sameAs IRI } <PubChemSynonymShape> { a [ sio:CHEMINF_000109 sio:CHEMINF_000339 sio:CHEMINF_000382 sio:CHEMINF_000406 sio:CHEMINF_000407 sio:CHEMINF_000409 sio:CHEMINF_000412 sio:CHEMINF_000446 sio:CHEMINF_000447 sio:CHEMINF_000467 sio:CHEMINF_000561 sio:CHEMINF_000562 sio:CHEMINF_000563 sio:CHEMINF_000564 sio:CHEMINF_000565 sio:CHEMINF_000566 ] ; sio:SIO_000300 xsd:string ; sio:SIO_000011 @<PubChemCompoundShape> ; dcterms:subject IRI * } <PubChemCompoundCompoundCooccurrenceShape> { a [ sio:SIO_001435 ] ; rdf:subject @<PubChemCompoundShape> ; rdf:object @<PubChemCompoundShape> ; sio:SIO_001157 IRI ; sio:SIO_000300 xsd:integer } <PubChemCompoundGeneCooccurrenceShape> { a [ sio:SIO_001257 ] ; rdf:subject IRI ; rdf:object IRI ; sio:SIO_001157 IRI ; sio:SIO_000300 xsd:integer } <PubChemCompoundDiseaseCooccurrenceShape> { a [ sio:SIO_000993 ] ; rdf:subject IRI ; rdf:object IRI ; sio:SIO_001157 IRI ; sio:SIO_000300 xsd:integer } <PubChemDiseaseDiseaseCooccurrenceShape> { a [ sio:SIO_001436 ] ; rdf:subject @<PubChemDiseaseShape> ; rdf:object @<PubChemDiseaseShape> ; sio:SIO_001157 IRI ; sio:SIO_000300 xsd:integer } <PubChemDiseaseGeneCooccurrenceShape> { a [ sio:SIO_000983 ] ; rdf:subject IRI ; rdf:object IRI ; sio:SIO_001157 IRI ; sio:SIO_000300 xsd:integer } <PubChemGeneGeneCooccurrenceShape> { a [ sio:SIO_001437 ] ; rdf:subject @<PubChemGeneShape> ; rdf:object @<PubChemGeneShape> ; sio:SIO_001157 IRI ; sio:SIO_000300 xsd:integer } <PubChemAuthorShape> { vcard2006:family-name xsd:string ; vcard2006:given-name xsd:string + ; vcard2006:fn xsd:string + ; vcard2006:organization-name xsd:string * } <PubChemAuthorOrcidShape> { vcard2006:hasUID IRI ? ; dcterms:source IRI ? } <PubChemBookShape> { a [ fabio:Book ] ; dcterms:creator @<PubChemAuthorShape> ; dcterms:date xsd:string ; dcterms:publisher xsd:string ; dcterms:title xsd:string ; prism:location xsd:string ; skos:exactMatch IRI ; prism:subtitle xsd:string ? ; prism:isbn xsd:string ? } <PubChemCellShape> { a [ obo:CLO_0000031 obo:SIO_010054 ] ; up:organism @<PubChemTaxonomyShape> ; skos:prefLabel xsd:string ; skos:altLabel xsd:string * ; obo:BFO_0000050 xsd:string * ; skos:closeMatch IRI * ; cito:isDiscussedBy @<PubChemReferenceShape> * } <PubChemDiseaseShape> { a [ obo:DOID_4 obo:MONDO_0000001 ] ; skos:prefLabel xsd:string ; skos:altLabel xsd:string * ; skos:closeMatch IRI * ; skos:relatedMatch IRI * } <PubChemGrantShape> { a [ frapo:Grant ] ; frapo:hasFundingAgency @<PubChemOrganizationShape> ; frapo:hasGrantNumber xsd:string } <PubChemJournalShape> { a [ fabio:Journal ] ; prism:eissn xsd:string ? ; prism:issn xsd:string ; dcterms:title xsd:string ; fabio:hasNLMJournalTitleAbbreviation xsd:string ; fabio:hasNationalLibraryOfMedicineJournalId xsd:string ; skos:exactMatch IRI * } <PubChemOrganizationShape> { a [ frapo:FundingAgency vcard2006:Organization ] ; skos:closeMatch IRI * ; vcard2006:country-name xsd:string ; vcard2006:fn xsd:string + }

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