TogoMCP

PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> PREFIX xsd: <http://www.w3.org/2001/XMLSchema#> PREFIX dc: <http://purl.org/dc/elements/1.1/> PREFIX dct: <http://purl.org/dc/terms/> PREFIX skos: <http://www.w3.org/2004/02/skos/core#> PREFIX obo: <http://purl.obolibrary.org/obo/> PREFIX schema: <https://purl.dsmz.de/schema/> PREFIX strain: <https://purl.dsmz.de/bacdive/strain/> PREFIX reference: <https://purl.dsmz.de/bacdive/reference/> PREFIX cell_shape: <https://purl.dsmz.de/bacdive/cell_shape/> PREFIX cell_size: <https://purl.dsmz.de/bacdive/cell_size/> PREFIX culture_medium: <https://purl.dsmz.de/mediadive/culture_medium/> PREFIX cell_motility: <https://purl.dsmz.de/bacdive/cell_motility/> PREFIX colony_morphology: <https://purl.dsmz.de/bacdive/colony_morphology/> PREFIX culture_collection_number: <https://purl.dsmz.de/bacdive/culture_collection_number/> PREFIX culture_ph: <https://purl.dsmz.de/bacdive/culture_pH/> PREFIX culture_temp: <https://purl.dsmz.de/bacdive/culture_temp/> PREFIX enzyme: <https://purl.dsmz.de/bacdive/enzyme/> PREFIX gc_content: <https://purl.dsmz.de/bacdive/gc_content/> PREFIX gram_stain: <https://purl.dsmz.de/bacdive/gram_stain/> PREFIX halophily: <https://purl.dsmz.de/bacdive/halophily/> PREFIX isolation: <https://purl.dsmz.de/bacdive/isolation/> PREFIX location: <https://purl.dsmz.de/bacdive/location/> PREFIX oxygen_tolerance: <https://purl.dsmz.de/bacdive/oxygen_tolerance/> PREFIX risk_assessment: <https://purl.dsmz.de/bacdive/risk_assessment/> PREFIX sequence_16s: <https://purl.dsmz.de/bacdive/sequence_16S/> PREFIX sequence_genomes: <https://purl.dsmz.de/bacdive/sequence_genomes/> PREFIX strain_designation: <https://purl.dsmz.de/bacdive/strain_designation/> PREFIX nutrition_type: <https://purl.dsmz.de/bacdive/nutrition_type/> PREFIX pathogenicity: <https://purl.dsmz.de/bacdive/pathogenicity/> PREFIX pigmentation: <https://purl.dsmz.de/bacdive/pigmentation/> PREFIX enrichment: <https://purl.dsmz.de/bacdive/enrichment> PREFIX spore_formation: <https://purl.dsmz.de/bacdive/spore_formation> <StrainShape> { a [ schema:Strain ] ; dct:description xsd:string ; rdfs:hasScientificName xsd:string ; rdfs:label xsd:string ; schema:hasBacDiveID xsd:integer ; schema:hasClass xsd:string ; schema:hasDesignation xsd:string ; schema:hasDomain xsd:string ; schema:hasFamily xsd:string ; schema:hasGenus xsd:string ; schema:hasOrder xsd:string ; schema:hasPhylum xsd:string ; schema:hasReference @<ReferenceShape> ; schema:hasSpecies xsd:string ; schema:hasSpeciesEpithet xsd:string ; schema:hasStrainNames xsd:string ; schema:hasStrainNumber xsd:string ; schema:hasTaxID xsd:integer ; schema:hasTaxonomicRank xsd:string ; schema:isTypeStrain xsd:trueclass ; schema:matchesTaxIDLevel xsd:string } <CellMotilityShape> { a [ schema:CellMotility schema:MicrobialPhenotype schema:Phenotype ] ; rdfs:label xsd:falseclass ; schema:describesStrain @<StrainShape> ; schema:hasPhenotypeInformation xsd:falseclass ; schema:hasReference @<ReferenceShape> ; schema:isMotile xsd:falseclass } <CellShapeShape> { a [ schema:CellMorphology schema:CellShape schema:Phenotype ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasReference @<ReferenceShape> } <CellSizeShape> { a [ schema:CellMorphology schema:CellSize schema:MicrobialPhenotype schema:Phenotype ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasLength xsd:string ; schema:hasLengthRangeEnd xsd:float ; schema:hasLengthRangeStart xsd:float ; schema:hasLengthUnit xsd:string ; schema:hasPhenotypeInformation xsd:float ; schema:hasReference @<ReferenceShape> ; schema:hasWidth xsd:float ? ; schema:hasWidthRangeEnd xsd:float ? ; schema:hasWidthRangeStart xsd:float ? ; schema:hasWidthUnit xsd:string ? } <ColonyMorphologyShape> { a [ schema:ColonyMorphology schema:MicrobialPhenotype schema:Phenotype ] ; schema:describesStrain @<StrainShape> ; schema:hasColonyColor xsd:string ? ; schema:hasColonyLength xsd:string ? ; schema:hasColonyLengthRangeEnd xsd:float ? ; schema:hasColonyLengthRangeStart xsd:float ? ; schema:hasColonyMorphologyInformation xsd:string ? ; schema:hasGrowthInformation ; schema:hasIncubationInformation xsd:string ? ; schema:hasIncubationPeriod xsd:string ? ; schema:hasIncubationPeriodRangeEnd xsd:float ? ; schema:hasIncubationPeriodRangeStart xsd:float ? ; schema:hasMediumComposition ; schema:hasColonyShape xsd:string ? ; schema:hasReference @<ReferenceShape> } <CultureCollectionNumberShape> { a [ schema:CultureCollectionNumber schema:Identifier schema:OrganismIdentifier schema:StrainNumber ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasLink xsd:string ; schema:hasReference @<ReferenceShape> } <CultureMediumShape> { a [ schema:ConceptualEntity schema:CultureCondition schema:CultureMedium ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasGrowthInformation xsd:trueclass ; schema:hasMediaDiveID xsd:string ; schema:hasMediaLink IRI ; schema:hasMediumGrowth xsd:trueclass ; schema:hasReference @<ReferenceShape> ; schema:providedBy xsd:string } <CulturePHShape> { a [ schema:ConceptualEntity schema:CultureCondition schema:CulturePH ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasGrowthInformation xsd:string ; schema:hasPHRangeEnd xsd:float ; schema:hasPHRangeStart xsd:float ; schema:hasReference @<ReferenceShape> ; schema:hasTestAbility xsd:string ; schema:hasTestType xsd:string } <CultureTempShape> { a [ schema:ConceptualEntity schema:CultureCondition schema:CultureTemperature ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:growthObserved xsd:string ; schema:hasGrowthInformation xsd:float ; schema:hasReference @<ReferenceShape> ; schema:hasTemperatureRangeEnd xsd:float ; schema:hasTemperatureRangeStart xsd:float ; schema:hasTestType xsd:string } <EnzymeShape> { a [ schema:Enzyme schema:GeneProduct schema:Protein ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasActivity xsd:string ; schema:hasECNumber xsd:string ? ; schema:hasEnzyme xsd:string ? ; schema:hasReference @<ReferenceShape> } <GCContentShape> { a [ schema:GCContent schema:MolecularProperty schema:PropertyOrAttribute ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasGCContentRangeEnd xsd:float ; schema:hasGCContentRangeStart xsd:float ; schema:hasGCInformation xsd:float ; schema:hasGCMethod xsd:string ; schema:hasReference @<ReferenceShape> } <GramStainShape> { a [ schema:CellMorphology schema:GramStain schema:MicrobialPhenotype schema:Phenotype ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasGramStain xsd:string ; schema:hasPhenotypeInformation xsd:string ; schema:hasReference @<ReferenceShape> } <HalophilyShape> { a [ schema:MetabolicPhenotype schema:Phenotype schema:SaltTolerance ] ; schema:describesStrain @<StrainShape> ; schema:hasReference @<ReferenceShape> } <IsolationShape> { a [ schema:IsolationInformation schema:IsolationSource schema:Origin ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> } <LocationShape> { a [ schema:LocationOfOrigin schema:Origin ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasCountry xsd:string ; schema:hasLatitude xsd:float ; schema:hasLocation xsd:float ; schema:hasLongitude xsd:float } <OxygenToleranceShape> { a [ schema:MetabolicPhenotype schema:OxygenTolerance schema:Phenotype ] ; schema:describesStrain @<StrainShape> ; schema:hasGrowthInformation xsd:string ; schema:hasOxygenTolerance xsd:string ; schema:hasReference @<ReferenceShape> } <RiskAssessmentShape> { a [ schema:RiskAssessment ] ; rdfs:comment xsd:string ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasBiosafetyLevel xsd:string ; schema:hasReference @<ReferenceShape> } <Sequence16SShape> { a [ schema:16SSequence schema:NucleotideSequence schema:RNASequence schema:rRNASequence ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:fromSequenceDB xsd:string ; schema:hasReference @<ReferenceShape> ; schema:hasSequenceAccession xsd:string ; schema:hasSequenceInformation xsd:string ; schema:hasSequenceLength xsd:integer ; schema:hasTaxID xsd:integer } <SequenceGenomesShape> { a [ schema:DNASequence schema:GenomeSequence schema:NucleotideSequence ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:fromSequenceDB xsd:string ; schema:hasAssemblyLevel xsd:string ; schema:hasReference @<ReferenceShape> ; schema:hasSequenceAccession xsd:string ; schema:hasSequenceInformation xsd:string ; schema:hasTaxID xsd:integer } <StrainDesignationShape> { a [ schema:Identifier schema:OrganismIdentifier schema:StrainDesignation schema:StrainNumber ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasReference @<ReferenceShape> } <ReferenceShape> { a [ schema:Reference ] ; dct:creator xsd:string ; rdfs:seeAlso IRI ; schema:hasBibliographicInformation xsd:string ; schema:hasCatalogueID xsd:string ; schema:hasCatalogueInformation xsd:string ; schema:hasCatalogueInstitution xsd:string ; schema:hasDocumentType xsd:string } <EntichmentShape> { a [ schema:EnrichmentProcedure schema:IsolationInformation schema:IsolationProcedures schema:Origin ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> } <NutritionTypeShape> { a [ schema:MetabolicPhenotype schema:NutritionType schema:Phenotype ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasReference @<ReferenceShape> } <PathogenicityShape> { a [ schema:ConceptualEntity schema:Pathogenicity ] ; schema:describesStrain @<StrainShape> ; schema:hasReference @<ReferenceShape> ; schema:isAnimalPathogen xsd:string ; schema:isHumanPathogen xsd:string ; schema:isPathogen xsd:string ; schema:isPlantPathogen xsd:string } <PigmentationShape> { a [ schema:CellMorphology schema:CellPigmentation schema:MicrobialPhenotype schema:Phenotype ] ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasPigmentInformation xsd:trueclass ; schema:hasPigmentName xsd:string ; schema:hasPigmentProduction xsd:trueclass ; schema:hasReference @<ReferenceShape> } <SporeFormationShape> { a [ schema:MicrobialPhenotype schema:Phenotype schema:SporeFormation ] ; rdfs:comment xsd:string ; rdfs:label xsd:string ; schema:describesStrain @<StrainShape> ; schema:hasAbility xsd:trueclass ; schema:hasReference @<ReferenceShape> }