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PREFIX mesh: <http://id.nlm.nih.gov/mesh/> PREFIX gdgsch: <http://jcggdb.jp/rdf/diseases/gdgdb-schema#> PREFIX ggdsch: <http://jcggdb.jp/rdf/diseases/ggdonto-schema#> PREFIX gmsch: <http://jcggdb.jp/rdf/diseases/gmncbi-schema#> PREFIX paconto: <http://jcggdb.jp/rdf/diseases/paconto#> PREFIX pacsch: <http://jcggdb.jp/rdf/diseases/paconto-schema#> PREFIX glycan: <http://purl.jp/bio/12/glyco/glycan#> PREFIX up: <http://purl.uniprot.org/core/> PREFIX taxo: <http://purl.uniprot.org/taxonomy/> PREFIX dct: <http://purl.org/dc/terms/> PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> PREFIX owl: <http://www.w3.org/2002/07/owl#> PREFIX skos: <http://www.w3.org/2004/02/skos/core#> PREFIX ncit: <http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#> PREFIX xsd: <http://www.w3.org/2001/XMLSchema#> <DiseaseconceptShape> { a [ skos:Concept pacsch:DiseasesPACDB ] ; gdgsch:diseaseName xsd:string ; ggdsch:conceptType @<DiseasNameConceptTypeShape> ; gmsch:causedBy @<UpecShape> + ; gmsch:causedBy @<EcoliShape> + ; pacsch:diseaseClass xsd:string ; pacsch:diseasesClassificationSystems @<DiseasesClassificationSystemsShape> + ; pacsch:inDiseasesClassification IRI ; dct:identifier xsd:string ; rdfs:label xsd:string ; rdfs:seeAlso IRI + ; skos:inScheme IRI } <DiseasesPACDBShape> { a [ owl:Class ] ; rdfs:comment xsd:string ; rdfs:label xsd:string ; rdfs:subClassOf IRI } <DiseasNameConceptTypeShape> { a [ owl:Thing ggdsch:ConceptType ] ; rdfs:label xsd:string ; rdfs:seeAlso xsd:string } <UpecShape> { a [ skos:Concept up:Strain ] ; ggdsch:conceptType @<ConceptpathogenicShape> ; gmsch:causes IRI + ; pacsch:organismForm @<OrganismFormShape> ; pacsch:pathogenMaterialType xsd:string ; pacsch:speciesForStrain xsd:string ; pacsch:strainName xsd:string ; pacsch:tropismInReference IRI + ; dct:identifier xsd:string ; up:rank IRI ; rdfs:label xsd:string } <EcoliShape> { a [ skos:Concept pacsch:Microorganisms ] ; gmsch:causes IRI + ; pacsch:ncbiTaxonomyId xsd:string ; pacsch:tropismInReference @<TropismInReferenceShape> + ; glycan:has_strain xsd:string + ; dct:identifier xsd:string ; up:rank IRI ; up:scientificName xsd:string ; up:strain IRI + ; rdfs:label xsd:string ; rdfs:seeAlso IRI } <DiseasesClassificationSystemsShape> { a [ skos:Concept pacsch:DiseasesPACDB ] ; gdgsch:diseaseName xsd:string ; ggdsch:conceptType @<DiseaseClassConceptTypeShape> ; ggdsch:meshUniqueID xsd:string ; ggdsch:umlsCUI xsd:string ; pacsch:broaderInDisClassifSystems @<PacdbDiseasesShape> ; dct:identifier xsd:string ; rdfs:label xsd:string ; rdfs:seeAlso IRI + ; skos:inScheme IRI } <DiseaseClassConceptTypeShape> { a [ owl:Thing ggdsch:ConceptType ] ; rdfs:comment_disease_class xsd:string ; rdfs:label xsd:string ; rdfs:seeAlso IRI + } <PacdbDiseasesShape> { a [ skos:Concept pacsch:DiseasesPACDB ] ; gdgsch:diseaseName xsd:string ; ggdsch:meshUniqueID xsd:string ; ggdsch:umlsCUI xsd:string ; pacsch:broaderInDisClassifSystems IRI ; dct:identifier xsd:string ; rdfs:label xsd:string ; rdfs:seeAlso IRI + } <ConceptpathogenicShape> { a [ owl:Thing ggdsch:ConceptType ] ; rdfs:label xsd:string ; rdfs:seeAlso IRI } <OrganismFormShape> { a [ owl:Thing pacsch:OrganismForms ] ; rdfs:label xsd:string ; rdfs:seeAlso IRI ; skos:altLabel xsd:string } <TropismInReferenceShape> { a [ pacsch:TropismInReference ] ; pacsch:describedInReference IRI ; pacsch:hasTropismTo @<TargetTissuesAndCellsShape> ; dct:references IRI } <TargetTissuesAndCellsShape> { a [ skos:Concept pacsch:TargetTissuesAndCells ] ; ggdsch:conceptType IRI ; pacsch:bioSourceName xsd:string ; pacsch:targetClassification @<TargetClassificationShape> + ; dct:identifier xsd:string ; rdfs:label xsd:string } <TargetClassificationShape> { a [ skos:Concept pacsch:TargetTissuesAndCells ] ; ggdsch:conceptType @<TargetsClassificationShape> ; ggdsch:umlsCUI xsd:string ; dct:identifier xsd:string ; rdfs:label xsd:string ; skos:altLabel xsd:string ; skos:broader IRI ; skos:prefLabel xsd:string } <TargetsClassificationShape> { a [ owl:Thing ggdsch:ConceptType ] ; rdfs:comment xsd:string ; rdfs:label xsd:string }

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