TogoMCP

PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> PREFIX owl: <http://www.w3.org/2002/07/owl#> PREFIX xsd: <http://www.w3.org/2001/XMLSchema#> PREFIX dct: <http://purl.org/dc/terms/> PREFIX obo: <http://purl.obolibrary.org/obo/> PREFIX ensembl: <http://rdf.ebi.ac.uk/resource/ensembl/> PREFIX gxaterms: <http://rdf.ebi.ac.uk/terms/expressionatlas/> PREFIX gxa: <http://rdf.ebi.ac.uk/resource/expressionatlas/> PREFIX foaf: <http://xmlns.com/foaf/0.1/> <DataSetShape> { a [ gxaterms:microarray_1colour_mrna_differential gxaterms:microarray_1colour_microrna_differential gxaterms:microarray_2colour_mrna_differential gxaterms:rnaseq_mrna_baseline gxaterms:rnaseq_mrna_differential gxaterms:proteomics_baseline ] ; dct:identifier xsd:string ; dct:description xsd:string ; obo:RO_0002162 IRI ; foaf:page IRI ; gxaterms:hasPart IRI + } <DifferentialAnalysisShape> { a [ gxaterms:RNASeqDifferentialAnalysis gxaterms:MicroarrayDifferentialExpressionAnalysis ] ; rdfs:label xsd:string ; gxaterms:hasFactorValue @<FactorShape> + ; gxaterms:hasOutput @<DifferentialExpressionShape> + ; gxaterms:hasReferenceAssay @<AssayShape> + ; gxaterms:hasTestAssay @<AssayShape> + } <BaselineAnalysisShape> { a [ gxaterms:BaselineExpressionAnalysis ] ; gxaterms:hasFactorValue @<FactorShape> + ; gxaterms:hasOutput @<BaselineExpressionShape> + ; gxaterms:hasReferenceAssay @<AssayShape> + } <AssayShape> { a [ gxaterms:Assay ] ; rdfs:label xsd:string ; dct:identifier xsd:string ; gxaterms:hasFactorValue @<FactorShape> + ; gxaterms:hasInputSampleCharacteristic @<SampleShape> + } <DifferentialExpressionShape> { a [ gxaterms:IncreasedDifferentialExpressionRatio gxaterms:DecreasedDifferentialExpressionRatio ] ; rdfs:label xsd:string ; gxaterms:foldChange xsd:float ; gxaterms:isOutputOf @<DifferentialAnalysisShape> ; gxaterms:pValue xsd:float ; gxaterms:refersTo (xsd:string OR IRI) + } <BaselineExpressionShape> { a [ gxaterms:BaselineExpressionValue ] ; rdfs:label xsd:string ; gxaterms:refersTo (xsd:string OR IRI) + ; gxaterms:fpkm xsd:integer } <FactorShape> { a [ <http://www.ebi.ac.uk/efo/EFO_0000001> ] ; rdfs:label xsd:string ; gxaterms:propertyType xsd:string ; gxaterms:propertyValue xsd:string } <SampleShape> { a [ obo:UBERON_0000001 ] ; rdfs:label xsd:string ; gxaterms:propertyType xsd:string ; gxaterms:propertyValue xsd:string }