Skip to main content
Glama

PubChem MCP Server

superstructure_search

Identify larger chemical compounds containing a specific molecular structure by inputting its SMILES string, with customizable result limits in the PubChem database.

Instructions

Find larger compounds that contain the query structure

Input Schema

NameRequiredDescriptionDefault
max_recordsNoMaximum number of results (1-10000, default: 100)
smilesYesSMILES string of the query structure

Input Schema (JSON Schema)

{ "properties": { "max_records": { "description": "Maximum number of results (1-10000, default: 100)", "maximum": 10000, "minimum": 1, "type": "number" }, "smiles": { "description": "SMILES string of the query structure", "type": "string" } }, "required": [ "smiles" ], "type": "object" }

MCP directory API

We provide all the information about MCP servers via our MCP API.

curl -X GET 'https://glama.ai/api/mcp/v1/servers/Augmented-Nature/PubChem-MCP-Server'

If you have feedback or need assistance with the MCP directory API, please join our Discord server