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Glama

PubChem MCP Server

superstructure_search

Identify larger chemical compounds containing a specific query structure. Input a SMILES string to retrieve up to 10,000 results, aiding in chemical analysis and compound exploration through the PubChem database.

Instructions

Find larger compounds that contain the query structure

Input Schema

NameRequiredDescriptionDefault
max_recordsNoMaximum number of results (1-10000, default: 100)
smilesYesSMILES string of the query structure

Input Schema (JSON Schema)

{ "properties": { "max_records": { "description": "Maximum number of results (1-10000, default: 100)", "maximum": 10000, "minimum": 1, "type": "number" }, "smiles": { "description": "SMILES string of the query structure", "type": "string" } }, "required": [ "smiles" ], "type": "object" }

MCP directory API

We provide all the information about MCP servers via our MCP API.

curl -X GET 'https://glama.ai/api/mcp/v1/servers/Augmented-Nature/PubChem-MCP-Server'

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