PubChem MCP Server

MIT License

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get_pharmacophore_features

Analyze pharmacophore features and binding site details for chemical compounds using PubChem CID. Extract molecular interaction insights for research and drug design.

Instructions

Get pharmacophore features and binding site information

Input Schema

Name	Required	Description	Default
`cid`	Yes	PubChem Compound ID (CID)

Input Schema (JSON Schema)

{
  "properties": {
    "cid": {
      "description": "PubChem Compound ID (CID)",
      "type": [
        "number",
        "string"
      ]
    }
  },
  "required": [
    "cid"
  ],
  "type": "object"
}

Install Server

HTTP connection URL

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get_pharmacophore_features
@Augmented-Nature/Augmented-Nature-PubChem-MCP-Server
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