PubChem MCP Server

MIT License

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get_compound_bioactivities

Retrieve bioassay results and activity outcomes for a specific compound by its PubChem CID. Filter results by activity type (active, inactive, inconclusive) to analyze compound bioactivity data.

Instructions

Get all bioassay results and activities for a compound

Input Schema

Name	Required	Description	Default
`activity_outcome`	No	Filter by activity outcome (default: all)
`cid`	Yes	PubChem Compound ID (CID)

Input Schema (JSON Schema)

{
  "properties": {
    "activity_outcome": {
      "description": "Filter by activity outcome (default: all)",
      "enum": [
        "active",
        "inactive",
        "inconclusive",
        "all"
      ],
      "type": "string"
    },
    "cid": {
      "description": "PubChem Compound ID (CID)",
      "type": [
        "number",
        "string"
      ]
    }
  },
  "required": [
    "cid"
  ],
  "type": "object"
}

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