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uniprot_get_uniref

Read-only

Retrieve a UniRef cluster by ID, returning its representative member, member list, common taxon, and last-updated date.

Instructions

Fetch a UniRef cluster by ID. Examples: UniRef100_P04637 (100 % identity, only exact-match members), UniRef90_P04637 (90 % identity), UniRef50_P04637 (50 %, broadest grouping). Returns representative member, member list, common taxon, last-updated date.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
uniref_idYes
response_formatNomarkdown

Output Schema

TableJSON Schema
NameRequiredDescriptionDefault
resultYes
Behavior4/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations declare readOnlyHint=true and openWorldHint=true. Description adds return fields (representative member, member list, common taxon, last-updated date) and notes behavior differences across identity thresholds. Sufficient additional context.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Five sentences including examples, no filler. Front-loaded with action, examples add value efficiently. Every sentence earns its place.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness3/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a read-only fetch tool with output schema, description covers return fields and ID format. However, omits documentation of the response_format parameter, leaving a minor completeness gap.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 0%, so description must compensate. It clarifies uniref_id format via examples but does not explain response_format parameter. Partial coverage, adequate but with a clear gap.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

Description explicitly states 'Fetch a UniRef cluster by ID' with specific verb and resource. Examples clarify ID format and identity levels. Distinguishes from sibling tools like uniprot_search_uniref.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines4/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

Implies usage when you have a UniRef ID, but does not explicitly contrast with search or provide when-not guidance. Context from examples and name is clear, but lacks explicit exclusion of alternatives.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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