get_eqtl_genes
Identify genes with expression quantitative trait loci (eQTL) associations within a specified genomic region using GTEx data, optionally filtered by tissue type.
Instructions
Get genes with eQTL associations for a genomic region
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| chr | Yes | Chromosome (e.g., chr1, chr2, chrX) | |
| datasetId | No | GTEx dataset ID (default: gtex_v8) | gtex_v8 |
| end | Yes | End position (1-based) | |
| start | Yes | Start position (1-based) | |
| tissueSiteDetailId | No | Tissue site detail ID (optional, for tissue-specific results) |
Input Schema (JSON Schema)
{
"properties": {
"chr": {
"description": "Chromosome (e.g., chr1, chr2, chrX)",
"type": "string"
},
"datasetId": {
"default": "gtex_v8",
"description": "GTEx dataset ID (default: gtex_v8)",
"type": "string"
},
"end": {
"description": "End position (1-based)",
"type": "integer"
},
"start": {
"description": "Start position (1-based)",
"type": "integer"
},
"tissueSiteDetailId": {
"description": "Tissue site detail ID (optional, for tissue-specific results)",
"type": "string"
}
},
"required": [
"chr",
"start",
"end"
],
"type": "object"
}