GTEx MCP Server

calculate_expression_correlation

Analyze gene expression correlation patterns across human tissues using GTEx data to identify co-expressed genes and biological relationships.

Instructions

Calculate expression correlation between genes across tissues

Input Schema

Name	Required	Description	Default
`datasetId`	No	GTEx dataset ID (default: gtex_v8)	gtex_v8
`gencodeIds`	Yes	Array of GENCODE gene IDs to compare

Input Schema (JSON Schema)

{
  "properties": {
    "datasetId": {
      "default": "gtex_v8",
      "description": "GTEx dataset ID (default: gtex_v8)",
      "type": "string"
    },
    "gencodeIds": {
      "description": "Array of GENCODE gene IDs to compare",
      "items": {
        "type": "string"
      },
      "type": "array"
    }
  },
  "required": [
    "gencodeIds"
  ],
  "type": "object"
}

MCP directory API

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