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Augmented-Nature

Unofficial PubChem MCP Server

assess_environmental_fate

Analyze chemical biodegradation and bioaccumulation to evaluate environmental persistence and ecological impact using PubChem data.

Instructions

Assess environmental fate including biodegradation and bioaccumulation

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
cidYesPubChem Compound ID (CID)

Implementation Reference

  • The handler function that executes the tool logic for 'assess_environmental_fate'. Currently a placeholder implementation returning a not-implemented message.
    private async handleAssessEnvironmentalFate(args: any) { return { content: [{ type: 'text', text: JSON.stringify({ message: 'Environmental fate assessment not yet implemented', args }, null, 2) }] }; }
  • src/index.ts:796-797 (registration)
    Dispatch case in the main request handler that routes execution to the specific tool handler.
    case 'assess_environmental_fate': return await this.handleAssessEnvironmentalFate(args);
  • Tool registration object containing the name, description, and input schema definition.
    { name: 'assess_environmental_fate', description: 'Assess environmental fate including biodegradation and bioaccumulation', inputSchema: { type: 'object', properties: { cid: { type: ['number', 'string'], description: 'PubChem Compound ID (CID)' }, }, required: ['cid'], }, },
  • src/index.ts:661-671 (registration)
    Registration of the tool in the tools list provided to the MCP server.
    { name: 'assess_environmental_fate', description: 'Assess environmental fate including biodegradation and bioaccumulation', inputSchema: { type: 'object', properties: { cid: { type: ['number', 'string'], description: 'PubChem Compound ID (CID)' }, }, required: ['cid'], }, },

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