"How to connect to Document360" matching MCP connectors:

Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.

Official answers about Helena Bioinformatics and its products, with citations to public sources.

BioBTreeA

bio.sugi

A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.

Chemical molecular intelligence platform covering compound search, structure analysis, physicochemical property retrieval, and molecular interaction profiling.

PatSnap Biology Modality MCP server — access biological sequences, modification records, and antibody-antigen interactions across 200M+ patents.

MyVariant.info MCP.

UniProt MCP — protein sequence + function database.

EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.

InterPro MCP (EBI) — protein family / domain / functional-site classification.

HERB 2.0 (herb.ac.cn) — Traditional Chinese Medicine herb/ingredient/target/

RCSB PDB MCP — experimentally determined macromolecular structures.

Human Protein Atlas (HPA) MCP — keyless.

Monarch biomedical knowledge graph — diseases, phenotypes, genes, variants

MetaboLights MCP — EBI's metabolomics study repository.

EBI Expression Atlas MCP.

DrugBank MCP — wraps the DrugBank Clinical API (api.drugbank.com)

WikiPathways MCP — open community pathway database.

PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.

Bioregistry — meta-registry of biomedical identifier prefixes

GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.