Bioinformatics MCP connectors

Hosted DNA language models: promoter, splice, enhancer, chromatin, expression, annotation

Query STRING interactions, enrichment, annotations, homology, and PPI networks.

Search GBIF species taxonomy, occurrence records, datasets, and publishers.

Look up genes, fetch sequences, predict variant consequences, find orthologs and xrefs via Ensembl.

Hosted DNA/RNA/protein tools: primers, oligos, PCR, cloning, CRISPR, alignment, batch & pipelines.

Canine genomics for agents: breed allele frequencies, AI pathogenicity + OMIA clinical disease layer

UniProt MCP — protein sequence + function database.

RCSB PDB MCP — experimentally determined macromolecular structures.

AlphaFold DB MCP — predicted protein structures.

ChEMBL MCP — drug discovery database (EBI).

Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.

IntAct (EBI) molecular-interaction database MCP. Keyless.

EBI BioStudies MCP.

EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.

Biomedical data: compounds, drug info, and molecular targets

EBI Complex Portal MCP.

QuickGO (EBI) MCP — Gene Ontology browser.

NCI Genomic Data Commons (GDC) MCP.

Rhea MCP — expert-curated database of biochemical reactions.

NCI CACTUS Chemical Identifier Resolver MCP.