sra_search
Search NCBI's Sequence Read Archive for sequencing experiments and runs using free text, accessions, or field syntax. Retrieve key accession IDs and run metadata to identify relevant datasets.
Instructions
Search NCBI's Sequence Read Archive (SRA) for sequencing experiments and runs.
The query may be free text, an accession (SRP study, SRX experiment, SRR run, SRS sample), or NCBI field syntax ("RNA-SEQ AND Homo sapiens[Organism]"). Results list experiment/study/sample accessions, organism, library strategy, run count, and first_run_accession for chaining into sra_get.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| limit | No | Maximum results | |
| query | Yes | Free text or accession — SRP study, SRX experiment, SRR run, SRS sample, or terms like "RNA-SEQ AND Homo sapiens[Organism]" | |
| offset | No | Result offset for pagination |