genbank_search
Search NCBI nucleotide records by gene name, accession, or field query to locate GenBank/RefSeq/INSDC sequences. Returns essential metadata such as length, organism, and topology for follow-up retrieval.
Instructions
Search NCBI nucleotide records (GenBank/RefSeq/INSDC).
Queries may be plain terms, an accession, or NCBI field syntax ("TP53[Gene Name] AND Homo sapiens[Organism]", "BRCA1[Gene Name]"). Results include accession.version, definition, length_bp, organism, and topology — chain accessions into genbank_get or genbank_genes.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| limit | No | Maximum results | |
| query | Yes | Nucleotide query, e.g. "TP53[Gene Name] AND Homo sapiens[Organism]" or an accession | |
| offset | No | Result offset for pagination | |
| organism | No | Filter by organism (e.g. "Homo sapiens") |