genbank_search
Search NCBI nucleotide records by gene, organism, accession, or field syntax to retrieve matching accessions, definitions, lengths, organisms, and topology for downstream sequence or gene lookup.
Instructions
Search NCBI nucleotide records (GenBank/RefSeq/INSDC).
Queries may be plain terms, an accession, or NCBI field syntax ("TP53[Gene Name] AND Homo sapiens[Organism]", "BRCA1[Gene Name]"). Results include accession.version, definition, length_bp, organism, and topology — chain accessions into genbank_get or genbank_genes.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| limit | No | Maximum results | |
| query | Yes | Nucleotide query, e.g. "TP53[Gene Name] AND Homo sapiens[Organism]" or an accession | |
| offset | No | Result offset for pagination | |
| organism | No | Filter by organism (e.g. "Homo sapiens") |