bc_search_pride_proteins
Search for specific proteins in PRIDE mass spectrometry projects by project accession, protein names, or accessions. Retrieve and sort results for proteomics research.
Instructions
Search proteins identified in a specific PRIDE project.
This function searches for proteins identified in a specific PRIDE mass spectrometry project. Useful for finding specific proteins of interest in proteomics datasets.
Args: project_accession (str): The PRIDE project accession to search in. keyword (str, optional): Search keyword for protein names or accessions. page_size (int, optional): Number of results (max 100). Defaults to 20. sort_field (str, optional): Sort field. Defaults to "accession". sort_direction (str, optional): Sort direction. Defaults to "ASC".
Returns: dict: Search results with proteins found in the specified project
Input Schema
Name | Required | Description | Default |
---|---|---|---|
keyword | No | Search keyword for protein names or accessions | |
page_size | No | Number of results to return (max 100) | |
project_accession | Yes | The PRIDE project accession to search proteins in | |
sort_direction | No | Sort direction: ASC or DESC | ASC |
sort_field | No | Field to sort by: accession, proteinName, gene | accession |