bc_get_string_interactions

Retrieve protein-protein interactions for a specified protein above a score threshold using species taxonomy ID. Facilitates biomedical research by accessing verified interaction data.

Instructions

Get all protein-protein interactions for a given protein with a combined score above the threshold.

Always provide the species parameter to ensure the correct protein is returned.

Args: protein_symbol (str): The name of the protein to search for (e.g., "TP53"). species (str): The species taxonomy ID (e.g., "10090" for mouse). min_score (int): Minimum combined score threshold (default: 700).

Returns: list: A list of dictionaries containing interacting proteins and their scores.

Input Schema

Name	Required	Description
`min_score`	No	Minimum combined score threshold
`protein_symbol`	Yes	The name of the protein to search for (e.g., 'TP53')
`species`	Yes	The species taxonomy ID (e.g., '10090' for mouse)

Input Schema (JSON Schema)

{
  "properties": {
    "min_score": {
      "default": 700,
      "description": "Minimum combined score threshold",
      "maximum": 1000,
      "minimum": 0,
      "title": "Min Score",
      "type": "integer"
    },
    "protein_symbol": {
      "description": "The name of the protein to search for (e.g., 'TP53')",
      "title": "Protein Symbol",
      "type": "string"
    },
    "species": {
      "description": "The species taxonomy ID (e.g., '10090' for mouse)",
      "title": "Species",
      "type": "string"
    }
  },
  "required": [
    "protein_symbol",
    "species"
  ],
  "type": "object"
}

Install Server

HTTP connection URL

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