bc_get_pride_project

Retrieve detailed metadata and experimental information for a specific PRIDE project by accession number, with options to include file details and similar projects for enhanced analysis.

Instructions

Get detailed information about a specific PRIDE project.

PRIDE (PRoteomics IDEntifications) is a public repository for mass spectrometry proteomics data. This function retrieves comprehensive information about a specific project including metadata, experimental details, and optionally associated files and similar projects.

Args: project_accession (str): The PRIDE project accession (e.g., "PRD000001"). include_files (bool, optional): Whether to include file information. Defaults to False. include_similar_projects (bool, optional): Whether to include similar projects. Defaults to False.

Returns: dict: Project information including metadata, experimental details, and optional file/similar project data

Input Schema

Name	Required	Description
`include_files`	No	Whether to include file information for the project
`include_similar_projects`	No	Whether to include similar projects based on metadata
`project_accession`	Yes	The PRIDE project accession (e.g., 'PRD000001')

Input Schema (JSON Schema)

{
  "properties": {
    "include_files": {
      "default": false,
      "description": "Whether to include file information for the project",
      "title": "Include Files",
      "type": "boolean"
    },
    "include_similar_projects": {
      "default": false,
      "description": "Whether to include similar projects based on metadata",
      "title": "Include Similar Projects",
      "type": "boolean"
    },
    "project_accession": {
      "description": "The PRIDE project accession (e.g., 'PRD000001')",
      "title": "Project Accession",
      "type": "string"
    }
  },
  "required": [
    "project_accession"
  ],
  "type": "object"
}

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