Export Research Dataset
export_research_datasetExport knowledge-graph data as JSON for downstream bioinformatics analysis, machine learning, and statistical modeling.
Instructions
Export the stored knowledge-graph data for downstream analysis.
Returns all stored entities as JSON-serialisable dicts, suitable for:
Loading into pandas DataFrames for ML feature engineering
Importing into R or Julia for statistical analysis
Feeding into downstream bioinformatics pipelines
Example (Python)::
import pandas as pd
result = await export_research_dataset(ExportInput(tables=["variants"]))
df = pd.DataFrame(result["data"]["variants"])
high_tier = df[df["clinical_tier"] == "HIGH"]Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| params | Yes |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
No arguments | |||