analyze_spatial_statistics
Analyze spatial autocorrelation and neighborhood enrichment in spatial transcriptomics data using Moran's I, Getis-Ord, co-occurrence, and more.
Instructions
Analyze spatial statistics and autocorrelation patterns.
Args:
data_id: Dataset ID
params: Analysis parameters (analysis_type, cluster_key, genes). See SpatialStatisticsParameters for all types.Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| data_id | Yes | ||
| params | No |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
| data_id | Yes | ||
| analysis_type | Yes | ||
| n_features_analyzed | No | ||
| n_significant | No | ||
| top_features | No | ||
| summary_metrics | No | ||
| results_key | No | ||
| statistics | No |