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Verify Biological Claim

verify_biological_claim
Read-onlyIdempotent

Decompose a biological claim into structured components and retrieve relation-specific evidence from databases to verify its accuracy.

Instructions

Verify a biological claim with structured claim decomposition and relation-specific database evidence.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
claimYesNatural language biological claim to verify.
context_geneNoOptional gene symbol to focus evidence gathering.
max_evidence_sourcesNoMaximum evidence providers to query. Default 5.
Behavior3/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already declare readOnlyHint=true and idempotentHint=true, indicating safe, idempotent behavior. The description adds 'structured claim decomposition' but does not elaborate on query behavior, evidence sources, or result format. No contradiction with annotations.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness3/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Single sentence is concise but uses jargon ('structured claim decomposition', 'relation-specific database evidence') that reduces clarity. The description could be more informative without being verbose.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Despite good annotations and schema, the description lacks explanation of output format, how decomposition works, or how to interpret evidence. For a complex verification tool, this is insufficient.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage is 100% (baseline 3). The description adds no information about the parameters (claim, context_gene, max_evidence_sources) beyond what is in the schema.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the tool verifies biological claims using structured decomposition and database evidence, which distinguishes it from sibling tools focused on specific analyses (e.g., pathway_analysis, variant_analysis). However, 'structured claim decomposition' and 'relation-specific database evidence' are somewhat vague.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance on when to use this tool versus alternatives (e.g., search_pubmed, get_gene_info). The description does not mention when not to use it or provide context for selecting it over siblings.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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