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Lucas-Servi

kegg-mcp-server

by Lucas-Servi

list_organisms

Read-onlyIdempotent

Retrieve a complete list of organisms available in KEGG, including their codes and names.

Instructions

List all organisms available in KEGG with their codes and names.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault

No arguments

Output Schema

TableJSON Schema
NameRequiredDescriptionDefault
resultYes
Behavior3/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already declare read-only, idempotent, and non-destructive behavior. The description adds that it lists all organisms, which is straightforward. No additional behaviors like pagination or rate limits are mentioned, but the tool is simple and the output schema provides return structure. The description adds minimal context beyond annotations.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is a single sentence that is concise and front-loaded. It avoids any unnecessary words or redundancy. Every word earns its place.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness5/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given the tool has no parameters, an output schema exists, and annotations cover safety and idempotency, the description is complete. It tells the agent exactly what the tool does and what it returns, with no missing information.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

There are no parameters, and the schema coverage is 100%. With zero parameters, the baseline is 4. The description does not add parameter semantics because none are needed. This is appropriate.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states that the tool lists all organisms available in KEGG, specifying that it returns codes and names. The verb 'list' and resource 'organisms' are explicit, and the purpose is distinct from sibling tools that search or get specific entries.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description does not provide guidance on when to use this tool versus alternatives. It lacks any mention of preconditions, context, or exclusions. For a tool that lists all organisms, it would be helpful to suggest it as a first step before using search or lookup tools.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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