TogoMCP

# Endpoint: https://rdfportal.org/primary/sparql # Description: get proteins in a dataset # Parameter: JpostDataset: (example: jpostdb:DS810_1) PREFIX jpost: <http://rdf.jpostdb.org/ontology/jpost.owl#> PREFIX sio: <http://semanticscience.org/resource/> PREFIX obo: <http://purl.obolibrary.org/obo/> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> PREFIX jpostdb: <http://rdf.jpostdb.org/entry/> SELECT ?JpostDataset ?taxonomy ?uniprot ?Protein FROM <http://jpost.org/graph/database> FROM <http://jpost.org/graph/ontology> WHERE { VALUES ?JpostDataset { jpostdb:DS810_1 } VALUES ?Protein__class { jpost:Protein obo:MS_1002401 } ?JpostDataset a jpost:Dataset ; jpost:hasProfile / jpost:hasSample / jpost:species ?taxonomy ; jpost:hasProtein ?Protein . ?Protein a ?Protein__class ; rdfs:seeAlso ?uniprot . } LIMIT 100