BioMCP

Feature: Retrieve Variant Details Scenario: Get variant details using HGVS ID Given I run "biomcp variant get chr7:g.140453136A>T --json" Then at least one variant should have field "_id" equal to "chr7:g.140453136A>T" And at least one variant should have field "mutdb.uniprot_id" equal to "VAR_018629" And at least one variant should have field "dbsnp.rsid" equal to "rs113488022" And at least one variant should have field "cadd.phred" equal to "32" Scenario: Get variant details using rsID Given I run "biomcp variant get rs113488022 --json" Then at least one variant should have field "_id" equal to "chr7:g.140453136A>T" And at least one variant should have field "mutdb.uniprot_id" equal to "VAR_018629" And at least one variant should have field "dbsnp.rsid" equal to "rs113488022" And at least one variant should have field "cadd.phred" equal to "32"