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81,811 servers. Updated
20 Best GitHub MCP Servers: compared and ranked, September 2026Ranked from 1,495 matching servers on stars, growth, downloads and maintenance. Updated .

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  • -
    license
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    maintenance
    Enables LLMs to interact with OpenEHR electronic health record systems by retrieving clinical archetypes, generating AQL queries from natural language, and executing queries against on-premise EHR databases. Supports OpenEHR Clinical Knowledge Manager integration and custom IIS-hosted EHR APIs for comprehensive medical data access.
  • A
    license
    A
    quality
    A
    maintenance
    MCP server that reads glucose data from a FreeStyle sensor via the LibreLinkUp API, providing current glucose and history with explicit coverage and gaps.
    2
    243
    MIT
  • A
    license
    A
    quality
    A
    maintenance
    An MCP server that enables querying rare-disease data from Orphanet, including disease nomenclature, cross-references, classifications, gene associations, HPO phenotypes, epidemiology, and natural history.
    19
    MIT
  • A
    license
    A
    quality
    A
    maintenance
    Enables interaction with the CEDAR metadata repository, including fetching templates, searching BioPortal ontology terms, and managing template instances.
    8
    MIT
  • F
    license
    A
    quality
    B
    maintenance
    MCP server for pediatric CKD follow-up management, providing tools to schedule follow-ups based on KDIGO 2024 guidelines, retrieve follow-up records, compute adherence scores, and access PEW history.
    4
  • A
    license
    A
    quality
    D
    maintenance
    Enables interaction with the CEDAR (Center for Expanded Data Annotation and Retrieval) metadata repository to fetch templates and retrieve template instances. Supports querying structured metadata and biomedical data annotations through the CEDAR platform.
    2
    MIT
  • A
    license
    B
    quality
    D
    maintenance
    Enables AI assistants to access and analyze Continuous Glucose Monitor (CGM) data from Nightscout, providing real-time readings, history, and analytics.
    7
    1
    MIT
  • A
    license
    Not graded
    quality
    B
    maintenance
    Enables AI assistants to look up, search, validate, navigate hierarchies, and expand value sets for SNOMED CT clinical terminology through the Model Context Protocol.
    8
    Apache 2.0
  • A
    license
    Not graded
    quality
    B
    maintenance
    MCP server for interacting with Galaxy bioinformatics platform, enabling AI assistants to connect to Galaxy instances, search and execute tools, manage workflows, and access other features.
    38
    MIT
  • A
    license
    Not graded
    quality
    D
    maintenance
    Enables interaction with FHIR resources on Google Cloud Healthcare API through a SmartOnFHIR gateway secured by Firebase Auth, providing access to patient data, medical records, and medical research tools like PubMed.
    1
    MIT
  • A
    license
    Not graded
    quality
    C
    maintenance
    Enables AI agents to control RELION 5.x cryo-EM structure determination software through natural language, providing 23 tools for the complete single-particle analysis pipeline.
    4
    MIT
  • A
    license
    Not graded
    quality
    D
    maintenance
    Enables MCP clients like Claude Desktop to interact with openEHR REST APIs (EHRbase) for creating compositions, managing EHRs, listing templates, and executing AQL queries.
    18
    MIT
  • A
    license
    Not graded
    quality
    C
    maintenance
    MCP-native scientific skills for reproducible computational biology and AI-driven drug-discovery workflows. It combines deterministic scientific tools with an MCP server to give AI agents real computational capabilities.
    Apache 2.0