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  • openpgx by open-pgx

    openpgxofficial

    open-pgx
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    Enables AI-driven pharmacogenomic analysis by querying structured genetic variant, drug response, and disease risk data. Supports natural language questions about medications, traits, and health risks based on user genome data, with privacy-first local execution.
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    10
    MIT
  • Noctua MCP Server by geneontology

    Noctua MCP Serverofficial

    geneontology
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    Enables editing and querying of Gene Ontology Causal Activity Models (GO-CAMs) through the Barista API. Supports model creation, individual and fact management, evidence addition, and causal pathway construction for biological knowledge representation.
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    18
    BSD 3-Clause
  • OMOPHub MCP Server by OMOPHub

    OMOPHub MCP Serverofficial

    OMOPHub
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    Provides AI agents with instant access to 10M+ OMOP medical vocabulary concepts for searching, mapping, and navigating clinical codes across SNOMED, ICD-10, RxNorm, LOINC, and more.
    Last updated
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    MIT
  • PDBe MCP Servers by PDBeurope

    PDBe MCP Serversofficial

    PDBeurope
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    Provides seamless access to the Protein Data Bank in Europe (PDBe) API and search capabilities, enabling AI clients to query protein structures, perform advanced searches, and retrieve structural biology data.
    Last updated
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    34
    Apache 2.0

  • plant-genomics-mcp

    musharna
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    ▎ Provides 32 tools for plant-genomics locus lookup across 11 free public backends (Ensembl Plants, Phytozome, UniProtKB, Europe PMC, QuickGO, NCBI BLAST, Gramene, KEGG, STRING-DB, ATTED-II, BAR). Takes a TAIR-style locus plus optional organism and returns gene metadata, functional/pathway annotation, interactions, co-expression, and literature — in single-locus, batch, and cross-source synthesis.
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    32
    32
    MIT

  • DICOM/HL7/FHIR

    NyxToolsDev
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    Built by a healthcare IT engineer with 19 years of PACS/RIS/integration experience. Bridges DICOM, HL7v2, and FHIR — maps between standards, decodes vendor private tags (GE, Siemens, Philips), generates Mirth Connect channels, and explains integration patterns. 12 tools covering tag lookup, message parsing, cross-standard mapping, and channel generation.
    Last updated
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    3
    MIT

  • mcp-pubmed

    PetrefiedThunder
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    An MCP server that provides access to PubMed and NCBI's biomedical literature database for searching articles, retrieving metadata, and tracking citations. It enables users to explore related research, browse MeSH vocabulary, and find free full-text links.
    Last updated
    6
    MIT

  • gnomAD MCP Server

    koido
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    Provides a programmatic interface to the Genome Aggregation Database (gnomAD) API across versions v2.1.1, v3.1.2, and v4.1.0. It enables users to query gene metadata, variant information, population frequencies, and ClinVar data through a unified schema.
    Last updated
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    5
    Apache 2.0

  • opdstar-nhi-mcp

    tatsuju
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    Taiwan's first public Model Context Protocol server for National Health Insurance data — rejection codes, ICD-10 mappings, audit indicators, semantic wiki search. Powered by OPDSTAR.
    Last updated
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    166
    MIT

  • mcp-pubmed

    benoitleq
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    An MCP server that provides direct access to PubMed and PubMed Central via the NCBI E-utilities API. It enables AI models to search biomedical literature, retrieve detailed article metadata, and download open-access full texts.
    Last updated
    5
    MIT

  • schrodinger-mcp

    Nimieeee
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    Enables AI assistants to execute computational chemistry and drug discovery workflows using Schrödinger Suites 2026, including protein preparation, docking, ADMET, QM/MM calculations, and job management.
    Last updated
    28
    MIT

  • DHIS2 MCP Server

    Dradebo
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    Enables comprehensive interaction with DHIS2 health information systems through 40+ tools covering complete Web API functionality. Supports data management, tracker programs, analytics, and bulk operations for DHIS2 development and administration.
    Last updated
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    MIT

  • viznoir

    kimimgo
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    Viznoir empowers AI agents to directly analyze and visualize complex 3D scientific and engineering data in cinematic resolution using a fully headless VTK engine. It enables LLMs to seamlessly execute advanced physical analysis, 3D rendering, and generate publication-ready animations purely through natural language commands.
    Last updated
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    13
    MIT

  • Pedigree MCP Server

    zzgael
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    Generates family pedigree tree diagrams as PNG or SVG images using standard genetic notation compliant with Bennett 2008/2022 NSGC guidelines. Supports comprehensive genealogical features including conditions, genetic testing results, twin relationships, carrier status, and adoption indicators.
    Last updated
    2
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    10
    MIT