"A search for regulations and regulatory information" matching MCP servers:

• paper-search-mcp

  upascal

  F

  license

  -

  quality

  C

  maintenance

  Enables searching for academic papers and preprints across multiple platforms including Semantic Scholar, arXiv, PubMed, and CrossRef. It provides access to research records, DOI lookups, and journal metadata through a unified interface deployed on Cloudflare Workers.

  Last updated 2026-03-13

• MCP PubMed Search

  wavelovey

  A

  license

  B

  quality

  D

  maintenance

  Server to search PubMed (PubMed is a free, online database that allows users to search for biomedical and life sciences literature). I have created on a day MCP came out but was on vacation, I saw someone post similar server in your DB, but figured to post mine.

  Last updated 2024-12-12

  1

  47

  MIT

• MCP Server for Cirro Data

  NorahZager

  -

  license

  -

  quality

  -

  maintenance

  This server enables multi-agent conversations for interacting with Cirro's biological data platform through its OpenAPI interface, auto-generated using AG2's MCP builder.

  Last updated 2025-06-03

• PubMed Enhanced Search

  leescot

  F

  license

  -

  quality

  D

  maintenance

  Enables search and retrieval of academic papers from PubMed database with advanced features like MeSH term lookup, publication statistics, and PICO-based evidence search.

  Last updated 2025-03-22

  5

• VEPmcp

  not-a-feature

  A

  license

  A

  quality

  C

  maintenance

  Enables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.

  Last updated 2025-08-18

  9

  1

  MIT

• Evo2 MCP Server

  not-a-feature

  A

  license

  -

  quality

  C

  maintenance

  Enables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).

  Last updated 2026-04-13

  2

  LGPL 3.0

• clinicaltrialsgov-mcp-server

  cyanheads

  A

  license

  A

  quality

  A

  maintenance

  Empowers AI agents with direct access to the official ClinicalTrials.gov database, enabling programmatic searching, retrieval, and analysis of clinical study data through a Model Context Protocol interface.

  Last updated 2026-07-09

  7

  1,393

  81

  Apache 2.0

• encode-toolkit

  ammawla

  A

  license

  A

  quality

  A

  maintenance

  MCP server and Claude Plugin for a full ENCODE Project genomic data and analysis toolkit — search, download, track, and analyze functional genomics experiments

  Last updated 2026-07-19

  20

  130

  37

  AGPL 3.0

• pubmed-mcp-server

  cyanheads

  A

  license

  A

  quality

  A

  maintenance

  A bridge connecting AI agents to NCBI's PubMed database through the Model Context Protocol, enabling seamless searching, retrieval, and analysis of biomedical literature and data.

  Last updated 2026-06-30

  10

  2,427

  121

  Apache 2.0

• reactome-db-mcp

  tc2fh

  A

  license

  A

  quality

  C

  maintenance

  Provides direct SQL access to a locally hosted Reactome database, enabling schema discovery, guarded read-only queries, and ergonomic helpers over the full relational schema.

  Last updated 2026-06-22

  9

  MIT

• Gen3 MCP Server

  delocalizer

  A

  license

  A

  quality

  D

  maintenance

  A Model Context Protocol (MCP) server for interacting with Gen3 data commons, with GraphQL query validation to reduce hallucinations.

  Last updated 2025-06-13

  5

  4

  MIT

• rnaseq-mcp

  sbarbi-gh

  F

  license

  A

  quality

  C

  maintenance

  Enables analysis of bulk RNA-seq data using natural language queries, executing R and Python in a Docker container with automatic sample anonymization and privacy controls.

  Last updated 2026-06-23

  7

• pubchem-mcp-server

  cyanheads

  A

  license

  A

  quality

  A

  maintenance

  Enables AI agents and applications to search, retrieve, and analyze chemical compounds, substances, and bioassays from PubChem's vast chemical information database through comprehensive tools for chemical research and discovery.

  Last updated 2026-07-03

  10

  944

  9

  Apache 2.0

• uniprot-mcp

  fzlzjerry

  A

  license

  A

  quality

  B

  maintenance

  MCP server that exposes the UniProt REST API to LLM clients, enabling search and retrieval of protein data via tools like search_uniprotkb, get_entry, and map_ids.

  Last updated 2026-06-14

  7

  MIT

• just-prs-mcp

  dna-seq

  A

  license

  A

  quality

  B

  maintenance

  MCP server for polygenic risk score analysis, wrapping just-prs to enable catalog search, PRS computation, VCF normalization, percentile and risk estimation, and quality assessment.

  Last updated 2026-07-23

  16

  1

  MIT

• hpo-link

  berntpopp

  A

  license

  A

  quality

  B

  maintenance

  MCP server that provides tools for querying the Human Phenotype Ontology (HPO) including term lookup, hierarchy exploration, cross-ontology mappings, and gene-phenotype-disease associations, all grounded in a local SQLite database for fast offline lookups.

  Last updated 2026-07-19

  17

  MIT

• ncbi-datasets-mcp

  syntheticgio

  F

  license

  A

  quality

  A

  maintenance

  An MCP server that gives Claude access to NCBI Datasets v2 — search genome assembly metadata, retrieve taxonomy records, and download data packages without leaving your conversation.

  Last updated 2026-06-22

  10
• 

  PDBe MCP Serversofficial

  PDBeurope

  A

  license

  A

  quality

  A

  maintenance

  Provides seamless access to the Protein Data Bank in Europe (PDBe) API and search capabilities, enabling AI clients to query protein structures, perform advanced searches, and retrieve structural biology data.

  Last updated 2026-07-16

  33

  36

  Apache 2.0
• 

  BioContextAI Knowledgebase MCPofficial

  biocontext-ai

  A

  license

  A

  quality

  C

  maintenance

  An MCP server that provides standardized access to biomedical knowledge bases and resources, enabling AI systems to retrieve verified information from sources like bioRxiv, EuropePMC, and various protein/gene databases.

  Last updated 2026-01-12

  52

  28

  Apache 2.0

• mcp-ubergraph-query

  twhetzel

  A

  license

  A

  quality

  D

  maintenance

  Enables AI assistants to query the Ubergraph biomedical ontology SPARQL endpoint with tools for custom SPARQL queries, term lookup, search, and hierarchy traversal.

  Last updated 2026-02-24

  4

  MIT