genome_summary_by_taxon
Search NCBI for genome assembly metadata by taxon name or ID. Get accession numbers, organism info, assembly statistics, annotation status, and submission details.
Instructions
Search NCBI for genome assemblies matching a taxon name or tax ID.
Returns assembly metadata including accession numbers, organism info, assembly statistics, annotation status, and submission details.
Args: taxon: Taxon name (e.g. "human", "Mus musculus") or NCBI tax ID assembly_level: Filter by level — chromosome, complete_genome, contig, scaffold assembly_source: Filter by source — all, genbank, refseq reference_only: Return only reference/representative genomes annotated_only: Return only annotated genomes limit: Maximum number of assemblies to return (capped by server config)
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| taxon | Yes | ||
| assembly_level | No | ||
| assembly_source | No | ||
| reference_only | No | ||
| annotated_only | No | ||
| limit | No |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
No arguments | |||