genome_summary_by_taxon
Search NCBI for genome assemblies by taxon name or ID. Retrieve assembly metadata including accession numbers, organism info, and annotation status.
Instructions
Search NCBI for genome assemblies matching a taxon name or tax ID.
Returns assembly metadata including accession numbers, organism info, assembly statistics, annotation status, and submission details.
Args: taxon: Taxon name (e.g. "human", "Mus musculus") or NCBI tax ID assembly_level: Filter by level — chromosome, complete_genome, contig, scaffold assembly_source: Filter by source — all, genbank, refseq reference_only: Return only reference/representative genomes annotated_only: Return only annotated genomes limit: Maximum number of assemblies to return (capped by server config)
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| taxon | Yes | ||
| assembly_level | No | ||
| assembly_source | No | ||
| reference_only | No | ||
| annotated_only | No | ||
| limit | No |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
No arguments | |||