Map Cross-Ontology
map_cross_ontologyRead-onlyIdempotent
Retrieve cross-references from an Orphanet disorder to external ontologies (OMIM, MONDO, ICD-10, etc.) with mapping relations. Optionally filter by source prefixes.
Instructions
List an Orphanet disorder's cross-references to other ontologies, grouped by source (OMIM/MONDO/ICD-10/ICD-11/UMLS/GARD/MeSH/MedDRA), each with its mapping relation. Optionally restrict to a subset of sources, or pass fields=['xrefs.OMIM'] for a sparse projection. count is the number of leaf mapping rows (individual targets), not the number of source groups. Signature: map_cross_ontology(term, prefixes=, response_mode=).
Input Schema
TableJSON Schema
| Name | Required | Description | Default |
|---|---|---|---|
| term | Yes | An ORPHAcode (ORPHA:166024 or 166024), a disease label/synonym, or an external xref CURIE that resolves to a single Orphanet term. | |
| prefixes | No | Restrict to these source prefixes, e.g. ['OMIM', 'MONDO']. | |
| response_mode | No | Verbosity: minimal|compact|standard|full (default compact). | compact |
Output Schema
TableJSON Schema
| Name | Required | Description | Default |
|---|---|---|---|
| hint | No | ||
| name | No | ||
| _meta | No | ||
| count | No | ||
| field | No | ||
| message | No | ||
| success | No | ||
| mappings | No | ||
| retryable | No | ||
| candidates | No | ||
| error_code | No | ||
| orpha_code | No | ||
| allowed_values | No | ||
| prefixes_filter | No | ||
| recovery_action | No | ||
| orphanet_version | No |