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berntpopp
by berntpopp

Related Servers

Alternatives to orphanet-link

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    Related Servers

    • A
      license
      A
      quality
      A
      maintenance
      MCP server that provides tools for querying the Human Phenotype Ontology (HPO) including term lookup, hierarchy exploration, cross-ontology mappings, and gene-phenotype-disease associations, all grounded in a local SQLite database for fast offline lookups.
      17
      1
      MIT
    • A
      license
      A
      quality
      C
      maintenance
      An MCP server for searching and accessing RNA sequencing datasets from the European Nucleotide Archive (ENA), supporting bulk, single-cell, and spatial transcriptomics with advanced filtering and download capabilities.
      11
      1
      Apache 2.0

    TDQS

    A4.1/5.0

    Scored across 19 tools

    Disambiguation4/5

    Most tools map to clearly distinct data facets, but get_disease can return xrefs, natural history, and other fields that have dedicated tools, and map_cross_ontology overlaps with get_disease's xrefs. The overlap is documented in descriptions, so an agent can still disambiguate, but it is not always obvious which tool is primary.

    Naming Consistency5/5

    Tool names follow a consistent snake_case verb_noun pattern: get_disease_*, resolve_*, find_diseases_by_*, search_diseases, and batch variants extend the same pattern predictably. This makes the toolset easy to navigate and guess.

    Tool Count3/5

    19 tools is on the heavy side for an MCP server, and some redundancy exists: get_disease can compose several facets that also have dedicated tools, and resolve_disease_batch/get_disease_batch add convenience but also surface area. The count is defensible for the breadth of Orphanet data, but feels slightly over-scoped.

    Completeness5/5

    The toolset covers the core Orphanet domain thoroughly: disease resolution and search, full disease records with genes/phenotypes/prevalence/natual-history/disability, reverse lookups by gene and phenotype, classification closure, external cross-reference mapping in both directions, and batch operations. There are no obvious dead ends or missing critical operations for a read-only data server.

    Maintenance

    ActivityActive
    ResponsivenessResponsive