list_all_attributes

Retrieve a filtered list of all attributes available for a specific dataset in Biomart, excluding less commonly used ones to streamline results. Use with caution for large datasets.

Instructions

Lists all available attributes for a given dataset with some filtering.

This function returns a filtered list of all attributes available for the specified
dataset. Some less commonly used attributes (homologs, microarray probes) are
filtered out to reduce the response size.

CAUTION: This function can return a large number of attributes and may be unstable
for certain datasets. Consider using list_common_attributes first.

Args:
    mart (str): The mart identifier (e.g., "ENSEMBL_MART_ENSEMBL")
    dataset (str): The dataset identifier (e.g., "hsapiens_gene_ensembl")

Returns:
    str: CSV-formatted table of all filtered attributes.

Example:
    list_all_attributes("ENSEMBL_MART_ENSEMBL", "hsapiens_gene_ensembl")

Input Schema

Name	Required	Description	Default
`dataset`	Yes
`mart`	Yes

Input Schema (JSON Schema)

{
  "properties": {
    "dataset": {
      "title": "Dataset",
      "type": "string"
    },
    "mart": {
      "title": "Mart",
      "type": "string"
    }
  },
  "required": [
    "mart",
    "dataset"
  ],
  "title": "list_all_attributesArguments",
  "type": "object"
}

Biomart MCP

list_all_attributes

Instructions

Input Schema

Input Schema (JSON Schema)

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