BioOntology MCP Server

MIT License

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search_ontologies

Find biological ontologies by name, description, or domain using this query tool. Include ontology views, JSON-LD context, and hypermedia links for comprehensive results.

Instructions

Search for ontologies by name, description, or domain

Input Schema

Name	Required	Description
`also_search_views`	No	Include ontology views (default: false)
`display_context`	No	Include JSON-LD context (default: true)
`display_links`	No	Include hypermedia links (default: true)
`include_views`	No	Include views in results (default: false)
`query`	No	Search query for ontologies (optional for listing all)

Input Schema (JSON Schema)

{
  "properties": {
    "also_search_views": {
      "description": "Include ontology views (default: false)",
      "type": "boolean"
    },
    "display_context": {
      "description": "Include JSON-LD context (default: true)",
      "type": "boolean"
    },
    "display_links": {
      "description": "Include hypermedia links (default: true)",
      "type": "boolean"
    },
    "include_views": {
      "description": "Include views in results (default: false)",
      "type": "boolean"
    },
    "query": {
      "description": "Search query for ontologies (optional for listing all)",
      "type": "string"
    }
  },
  "required": [],
  "type": "object"
}

Install Server

HTTP connection URL

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