AlphaFold MCP Server

MIT License

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compare_structures

Analyze and compare up to 10 protein structures from AlphaFold by inputting UniProt accessions. Identify structural similarities and differences for in-depth research.

Instructions

Compare multiple AlphaFold structures for analysis

Input Schema

Name	Required	Description	Default
`uniprotIds`	Yes	Array of UniProt accessions to compare (2-10)

Input Schema (JSON Schema)

{
  "properties": {
    "uniprotIds": {
      "description": "Array of UniProt accessions to compare (2-10)",
      "items": {
        "type": "string"
      },
      "maxItems": 10,
      "minItems": 2,
      "type": "array"
    }
  },
  "required": [
    "uniprotIds"
  ],
  "type": "object"
}

Install Server

HTTP connection URL

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search_structures
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