AlphaFold MCP Server

MIT License

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batch_download

Download multiple protein structure files (PDB or CIF format) using UniProt accessions. Supports batch processing of up to 20 files at once.

Instructions

Download multiple structure files

Input Schema

Name	Required	Description	Default
`format`	No	File format (default: pdb)
`uniprotIds`	Yes	Array of UniProt accessions (max 20)

Input Schema (JSON Schema)

{
  "properties": {
    "format": {
      "description": "File format (default: pdb)",
      "enum": [
        "pdb",
        "cif"
      ],
      "type": "string"
    },
    "uniprotIds": {
      "description": "Array of UniProt accessions (max 20)",
      "items": {
        "type": "string"
      },
      "maxItems": 20,
      "minItems": 1,
      "type": "array"
    }
  },
  "required": [
    "uniprotIds"
  ],
  "type": "object"
}

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