AlphaFold MCP Server

MIT License

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batch_download

Download multiple protein structure files in bulk (PDB or CIF formats) using UniProt IDs, streamlining access to AlphaFold MCP Server data for efficient research workflows.

Instructions

Download multiple structure files

Input Schema

Name	Required	Description	Default
`format`	No	File format (default: pdb)
`uniprotIds`	Yes	Array of UniProt accessions (max 20)

Input Schema (JSON Schema)

{
  "properties": {
    "format": {
      "description": "File format (default: pdb)",
      "enum": [
        "pdb",
        "cif"
      ],
      "type": "string"
    },
    "uniprotIds": {
      "description": "Array of UniProt accessions (max 20)",
      "items": {
        "type": "string"
      },
      "maxItems": 20,
      "minItems": 1,
      "type": "array"
    }
  },
  "required": [
    "uniprotIds"
  ],
  "type": "object"
}

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