"Using MySQL to Search a Database" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceMatching Connector Tools:
Read-only MCP connector for The Dose Guy source-linked peptide and compound database. Search 260+ compounds, compare vendors and prices, inspect ranking evidence, and retrieve canonical page links. No authentication required.
Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Protein research over UniProtKB — search by function, fetch curated records, map IDs, proteomes.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
HLA nomenclature and match checks against a pinned IPD-IMGT/HLA release. No patient identifiers.
BioBricks: the site's own MCP server — dataset, enquiry (enquiry = a human handoff, not a...
Official answers about Helena Bioinformatics and its products, with citations to public sources.
Search and resolve Naturepedia, Robbie's Razor, and GC-MRD-v2.0 canonical resources.
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
Chemical molecular intelligence platform covering compound search, structure analysis, physicochemical property retrieval, and molecular interaction profiling.
EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
Mondo — condition-string resolver onto the Mondo Disease Ontology.
MetaboLights MCP — EBI's metabolomics study repository.
CATNAP (Compile, Analyze, and Tally Neutralizing Antibody Panels) + the
