Corollary — scientific AI models, tools and databases
Server Details
Find open biology and chemistry AI models, bioinformatics tools and databases, and run them online.
- Status
- Healthy
- Uptime
- 100.0% over the last 24 hours
- Last Tested
- Transport
- Streamable HTTP · MCP 2025-11-25
- URL
- ChatGPT
- –
- Claude
- –
TDQS
Scored across 6 tools
The two list tools (list_science_tasks vs list_scientific_ai_tasks) are nearly indistinguishable in concept, differing only between 'scientific analyses with a method page' and 'task categories for model comparison'. Similarly, compare_scientific_ai_for_task and search_scientific_ai both answer 'which model/tool should I use for this biology task', so boundaries blur despite descriptive text helping somewhat.
All names use a consistent snake_case verb-first pattern (compare_, get_, list_, search_, how_to_run_). The deviation is the inconsistent subject terminology — 'science_task(s)' versus 'scientific_ai' versus 'scientific_ai_tasks' — which makes the two list tools hard to distinguish at a glance.
Six tools is a reasonable, well-scoped set for a catalogue/reference server covering search, listing, comparison, detail lookup and how-to guidance. It is on the lean side, but each tool maps to a distinct access pattern.
The surface covers the core reference workflows: enumerate tasks, search the catalogue, compare options for a task, fetch full entry details, and get step-by-step how-to-run guidance. Minor gap: no dedicated way to browse/list all entries by resource type (models vs databases vs pipelines) other than free-text search.
Available Tools
6 toolscompare_scientific_ai_for_taskCompare the models or tools for a taskARead-onlyInspect
For a task such as 'protein structure prediction', 'protein design', 'antibody design', 'molecular docking', 'single-cell', 'ADMET', 'phage genomics' or 'CRISPR', return every model or tool Corollary lists for it — what each does, licence, whether it runs online — and guidance on how to choose between them.
Inputs: task (required).
get_scientific_ai_detailsExplain one model, tool, database, pipeline or datasetARead-onlyInspect
Full reference for one entry: what it is, how it works, key facts, uses, strengths, limitations, citation, licence, and how to run it on Corollary. Pass a name ('RFdiffusion'), an id ('esmfold2', 'nf-core/rnaseq', 'facebook/esm2_t33_650M_UR50D') or a corollary-labs.com URL.
Inputs: ref (required).
how_to_run_science_taskHow to do a scientific analysis on CorollaryARead-onlyInspect
For a piece of scientific work someone wants done — 'annotate a phage genome', 'deconvolve bulk RNA-seq into cell types', 'check assembly completeness', 'dock a ligand', 'fit an IC50', 'process accelerometer data', 'call variants', 'find CRISPR arrays' — return how it is done on Corollary: the stages in order, the programs, models and databases used, what commonly goes wrong, and the page that starts it. Use this when the user wants a task done rather than a model named.
Inputs: task (required).
list_science_tasksList the analyses Corollary runsBRead-onlyInspect
Every scientific analysis Corollary has a page and a method for, with its URL.
Inputs: no named parameters.
list_scientific_ai_tasksList the task categoriesBRead-onlyInspect
The task categories Corollary compares models and tools in, with a page URL for each.
Inputs: no named parameters.
search_scientific_aiSearch scientific AI models, tools, databases, pipelines and datasetsARead-onlyInspect
Search Corollary's catalogue of open scientific AI models (protein structure prediction, protein design, docking, antibodies, genomics, single-cell, chemistry/ADMET, simulation, pathology, weather), bioinformatics programs (BUSCO, samtools, BLAST…), scientific databases (UniProt, PDB, gnomAD…), nf-core pipelines and datasets. Each result says what it does, its licence and whether it can be run online on Corollary with no GPU or installation, with the page URL. Use it when a user asks which model or tool to use for a biology or chemistry task, or where to run one.
Inputs: query (required), kind, limit.
Tool Schema Changelog
Recent tool additions, removals, and schema changes observed during successful MCP inspections.
2 tool updates
- Added
how_to_run_science_task - Added
list_science_tasks
4 tool updates
- First observed
compare_scientific_ai_for_task - First observed
get_scientific_ai_details - First observed
list_scientific_ai_tasks - First observed
search_scientific_ai
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