"Using Cline as a Knowledge Graph for Coding" matching MCP servers:

Builds and manages a cardiology-focused knowledge graph in Neo4j by extracting medical entities and relationships from documents using LLMs. It enables users to ingest PDFs, refine extracted data, and perform natural language queries to gain clinical insights.

Search Vascue's public healthcare-operations documentation: AI front desk for clinics, provider-side insurance claims automation, Cliniko integration, security. Public content only.

MCP server for connecting Claude Desktop to a local medical knowledge base with real-time file watching, enabling natural language interaction with medical documents.

Enables searching and retrieving detailed medical knowledge on diseases, vaccines, medical examinations, and treatments, supporting health-related queries and medical concept understanding.

Enables assistants and editors to query a curated, read-only evidence graph for graded findings about what compounds, supplements, nutrients and foods have been shown to do in the human body, each with an automatic A–F grade, the verbatim source sentence, paper, population, dose and a permalink, plus reference-database relations labelled as hypotheses. It also exposes no products, prices or purchase links, and returns no medical advice or rankings of what to take.

Enables LLMs and AI agents to search a biomedical knowledge graph for concepts and study variables, traverse semantic relationships, and look up BioData Catalyst PIC-SURE paths for cohort building.

Enables LLMs and AI agents to query a biomedical knowledge graph stored in RedisGraph, with tools for concept search, synonym enrichment, and study variable discovery through semantic relationships.

Enables MCP hosts to run provenance-aware computational epitope research workflows, including sequence and immune-evidence analysis, structure and chemistry calculations, molecular docking, and checksummed 3D artifact exports.

Enables graph-based fraud propagation scoring for clinical diagnostics, diffusing risk across entities with a deterministic fallback when the ML model is unavailable.

Enables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.

Enables scenario-based clinical communication practice through MCP tools for discovering scenarios, starting sessions, sending practitioner turns, and receiving evidence-linked evaluation feedback.

Enables LLM agents to query de-identified FHIR-shaped hospital data through audited, read-only tools for patients, encounters, conditions, observations, medications, and interaction checks, while any medication write stays a draft that a clinician must confirm out-of-band.

Enables querying a FlyWire fruit-fly brain atlas to search, count, describe, and page through 139,248 neurons by cell type, neurotransmitter, superclass, or side using token-efficient selection tickets.

Enables AI assistants to access Medikode's medical coding platform for validating CPT/ICD-10 codes, performing chart quality assurance, parsing EOBs, calculating RAF scores, and extracting HCC codes from clinical documentation.

Unified MCP server for the AmorSaúde ecosystem, combining SQL query, semantic search, medical record similarity, audio transcription, and LLM-as-Judge evaluation tools for multiple healthcare agents.

Enables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).

Exposes four CMS public datasets as callable tools in Claude conversations, enabling natural-language real-world evidence analytics without SQL expertise.

Enables Claude to read a user's Oura Ring data—including sleep, readiness, activity, stress, workouts, heart rate, and personal info—through a self-hosted, read-only connector deployed to the user's own Vercel account.

Enables Alexa+ users to coordinate household pet care by logging feeding, medication, activity, litter, and health observations for dogs and cats, with evidence-grounded triage, Q&A, and daily briefings backed by a verified veterinary library and citations.

An open source biomedical research agent that provides LLMs with 28 tools for drug discovery, protein analysis, literature search, medical imaging, omics, and sandbox execution, all running locally via Ollama and MedGemma.

This server enables interacting with the National Digital Health Mission's Health Information User (HIU) API, allowing agents to access and manage health information through the Multi-Agent Conversation Protocol.

Enables searching the NIAID Data Ecosystem for biomedical research resources including datasets, clinical studies, and publications using Elasticsearch queries.

Enables natural language queries about Swiss mandatory health insurance coverage for medications and medical devices using official BAG lists.

Enables querying Brazilian PCDT clinical protocols from Conitec and generating concise, context-specific treatment summaries using a local LLM, with verified literal citations and links to official PDFs.

An MCP server that lets an LLM answer a pharmacist's question about drug shortages by normalizing drug names, finding pharmacologic alternatives, and checking their shortage status using public FDA and NLM data.

Enables MCP-compatible clients to act as an AI receptionist for a small medical clinic, handling appointment booking and rescheduling, patient registration, intake, reminders, and FAQ answers.

Explains why two scientific papers disagree. A contradiction explorer for bench scientists that compares two studies' designs and grounds every claim in a verbatim quote from the source text.

A structure-aware MCP server for querying the SPOKE biomedical knowledge graph, enabling entity resolution, schema introspection, path finding, and safe Cypher queries for biomedical knowledge inference.

MyChart MCP Server

Enables scoring the WHO-5 Well-Being Index from five answers, returning a 0–100 score and a low, reduced, or normal band without providing a diagnosis.

Verified ICD-10-CM code lookup & validation for AI agents — official descriptions, not guesses.

Monitors PubMed and medRxiv for configurable research topics, summarizes papers using a local LLM, and stores deduplicated results in a local database.

Enables querying Anvisa's open data for drug registration status and recent medical devices, with heuristic AI-use classification using a locally hosted LLM.

Enables Claude Desktop to query and analyze diabetes data from Omnipod 5 and Glooko through natural language, providing clinical audit and triage insights such as time in range, trends, and bolus analysis.

Provides interpretable variant effect predictions for 4.2 million ClinVar variants using the EVEE API. Enables searching, comparing, and analyzing genetic variants with AI-generated mechanistic interpretations and disruption profiles.

MCP server for automated ICD-10 medical coding. Code clinical text to ICD-10-CM diagnoses, search 74,000+ codes, and de-identify PHI via the AutoICD API.

MCP server exposing REINVENT4 generative molecular-design operations as validated, LLM-callable tools for drug discovery, including sampling, transfer learning, reinforcement learning, and molecular analysis.

Exposes NCBI PubMed as MCP tools for searching literature, fetching abstracts, exploring citation graphs, and finding author publications without requiring an API key.

An MCP server for longevity and metabolic medicine that provides a medication catalog, dosing protocols, contraindication screening, drug interaction checks, lab recommendations, and patient intake pathways across 35 compounds.

Enables coding agents to interact with the Reactome pathway database, including search, lookup, hierarchy traversal, SBML/SBGN export, and gene-set enrichment analysis.