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89,115 servers. Updated
20 Best PDF MCP Servers: compared and ranked, September 2026Ranked from 1,467 matching servers on stars, growth, downloads and maintenance. Updated .

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    Enables language models to search biomedical literature, fetch sequences, and follow links across Entrez databases through eleven read-only tools wrapping the nine NCBI Entrez E-utilities. It handles URL building, pacing, redirects, response caps, and API-key redaction so queries can be answered without a browser or scraping.
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    MIT
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    An MCP server that provides direct access to PubMed and PubMed Central via the NCBI E-utilities API. It enables AI models to search biomedical literature, retrieve detailed article metadata, and download open-access full texts.
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    MIT
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    An MCP server that provides mouse genetics data from Mouse Genome Informatics (MGI), enabling LLM agents to query markers, mutations, alleles, phenotypes, and disease models.
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    MIT
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    Enables LLM agents to search biomedical literature, retrieve article details, find related papers, manage caching, and download open-access full texts through MCP with structured, agent-friendly responses.
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    Apache 2.0
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    Enables editing and querying of Gene Ontology Causal Activity Models (GO-CAMs) through the Barista API. Supports model creation, individual and fact management, evidence addition, and causal pathway construction for biological knowledge representation.
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    BSD 3-Clause
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    An MCP server that exposes a DICOMweb-compliant DICOM archive to AI assistants. It lets any MCP-capable client search studies, series and instances, inspect metadata, read Structured and Encapsulated PDF Reports, and render image frames — all through natural language.
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    26 npm
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    MIT
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    Enables read-only interaction with DHIS2 health data by searching indicators and querying compact analytics results, designed for small local models.
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    MIT
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    Enables querying simulated healthcare professional engagement data from Supabase, including HCP profiles, interactions, consent status, prescribing trends, and segment analytics through natural language.
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    An MCP server for NONMEM pharmacometric modeling that provides structured access to model parsing, execution, and results analysis. It enables users to perform diagnostics, manage PsN workflows, and translate models to mrgsolve for PK simulations through natural language.
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    MIT
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    Enables the generation, mutation, and evolution of DNA and protein sequences using various evolutionary models and phylogenetic algorithms. It supports realistic next-generation sequencing read simulation and population-level evolutionary tracking for bioinformatics research and testing.
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    BSD 2-Clause "Simplified"
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    Enables language models to query a clinical relational database through a small set of validated, row-capped tools, with evaluation of answerability and data leakage.
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    Provides read/write access to any FHIR-compliant healthcare API with built-in validation, supporting resource management, search operations, and granular permissions through natural language.
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    Enables AI agents to search the Chemspace API for synthesizable building blocks and screening compounds using exact matches, substructure searches, and similarity searches by SMILES strings.
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    MIT
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    Predicts CRISPR gene dependencies and drug targets by integrating literature, regulatory/PPI networks, and genome-scale metabolic models.
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    Apache 2.0
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    Automatically analyzes and dispatches user tasks to appropriate handlers, supporting development task processing via Miyabi Agent and medical AI academic article generation. Provides intelligent task classification and routing for development, writing, and general tasks.
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