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  • MeSH MCP

    msuicaut
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    Connects Claude to the U.S. National Library of Medicine MeSH APIs to search and retrieve medical authority data, descriptors, and qualifiers. It enables library and metadata staff to perform subject analysis and confirm terminology within an AI-assisted cataloging workflow.
    Last updated
    4
    1
    GPL 3.0

  • Rosetta MCP Server

    Arielbs
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    An MCP server that enables AI coding assistants to interact with Rosetta, PyRosetta, and Biotite for running RosettaScripts, validating XML, translating between Rosetta and Biotite, scoring structures, and querying documentation.
    Last updated
    19
    238
    16
    MIT

  • pubmed-mcp

    dam2452
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    MCP server for accessing NCBI PubMed/PMC databases, enabling search, retrieval of summaries and full records, citation export, and ID conversion through various APIs.
    Last updated
    12
    1
  • Noctua MCP Server by geneontology

    Noctua MCP Serverofficial

    geneontology
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    Enables editing and querying of Gene Ontology Causal Activity Models (GO-CAMs) through the Barista API. Supports model creation, individual and fact management, evidence addition, and causal pathway construction for biological knowledge representation.
    Last updated
    18
    BSD 3-Clause

  • loinc-mcp

    robsyc
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    Enables searching LOINC codes and retrieving detailed information including panel members and answer options via the LOINC Search API.
    Last updated
    2
    1
    MIT

  • Define-XML MCP Server

    defineEditor
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    A TypeScript MCP server for interacting with CDISC Define-XML 2.0 and 2.1 files, enabling users to load, search, and retrieve clinical data metadata including datasets, variables, and codelists. It supports local file processing with document caching and provides responses in both JSON and Markdown formats.
    Last updated
    13

  • mcp-pubmed

    PetrefiedThunder
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    An MCP server that provides access to PubMed and NCBI's biomedical literature database for searching articles, retrieving metadata, and tracking citations. It enables users to explore related research, browse MeSH vocabulary, and find free full-text links.
    Last updated
    6
    MIT

  • CEDAR MCP Server

    BACH-AI-Tools
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    Enables interaction with the CEDAR (Center for Expanded Data Annotation and Retrieval) metadata repository to fetch templates and retrieve template instances. Supports querying structured metadata and biomedical data annotations through the CEDAR platform.
    Last updated
    2
    MIT

  • BioNext-mcp

    Cherine0205
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    Enables bioinformatics analysis through natural language conversations with Claude Desktop, automatically generating and executing Python scripts to produce HTML reports and visualizations.
    Last updated
    3
    5
    8
    MIT

  • phi-guard-mcp

    dcl632
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    MCP server and CLI for detecting, redacting, and auditing PHI in medical text before it is sent to AI agents, with tools for scan, redact, audit, and validate operations.
    Last updated
    4
    MIT

  • vmd-mcp

    Alierkn
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    quality
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    maintenance
    Drive VMD headlessly from any MCP client to analyze structures and trajectories, and ray-trace publication-quality images with no display.
    Last updated
    12
    MIT