"A database of diseases with associated genetic variants and sequencing information" matching MCP servers:

Retrieves comprehensive patient information including personal details, insurance plans, and employee data through the get_patient tool. Supports Docker Compose deployment and integration with Watson Orchestrate for healthcare data access.

Enables AI agents to query free biomedical and pharmaceutical APIs for clinical trials, drug data, molecular structures, adverse events, and research literature.

Annotate variants by with a deep and rich set of data. Can annotate: genetic change, rsID, CAid, HGVS (g./c./p.), protein change.

Public read-only MCP server providing structured access to Atlarium habitat data and advisory functions for aquariums, terrariums, and related systems.

Provides oncology data (research, news, FDA approvals, clinical trials) and IBM MAMMAL biomedical predictions (PPI, DTI, ClinTox) as MCP tools. Allows AI agents to query cancer datasets and run predictions through a remote MCP server.

An MCP server that grounds protein research in the UniProt SPARQL endpoint, providing tools for querying proteins, sequences, variants, diseases, and more via intent-named tools and raw SPARQL.

Enables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).

Provides interpretable variant effect predictions for 4.2 million ClinVar variants using the EVEE API. Enables searching, comparing, and analyzing genetic variants with AI-generated mechanistic interpretations and disruption profiles.

Enables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.

A high-performance MCP server that gives LLMs access to 25 biomedical tools federated across 50+ upstream APIs for genes, variants, drugs, diseases, literature, clinical trials, and structural biology.

MCP server that exposes the Open Targets Platform GraphQL API as a set of tools for querying biomedical data such as targets, diseases, drugs, and genetic evidence.

Provides access to the Ensembl genomics REST API with 30+ tools for genomic data including gene lookup, sequence retrieval, genetic variants, cross-species homology, phenotypes, and regulatory features.

Enables querying Chinese medical information (drugs, diseases, doctors, symptoms) from the Dayi platform with structured output and auto-type detection.

An MCP server that exposes the KEGG REST API — pathways, genes, compounds, reactions, enzymes, diseases, drugs, modules, orthology, glycans, and BRITE hierarchies, with cross-database linking. Provides 34 tools and 8 resource templates.

Enables AI agents to query the PomBase fission yeast model-organism database for genetic and molecular data through the Pipeworx MCP gateway.

Read-only biomedical MCP server connecting PubMed, ClinicalTrials.gov, ClinVar, gnomAD, OncoKB, Reactome, KEGG, UniProt, PharmGKB, CPIC, OpenFDA, Monarch Initiative, GWAS Catalog, and more. One command grammar for all biomedical entities — genes, variants, diseases, drugs, trials, articles, phenotypes, pathways, proteins, diagnostics, and adverse events. 27 tools. Apache-2.0 license.

Provides programmatic access to curated SNP data by trait, enabling LLM-powered applications to search, interpret, and discover genetic variants.

Enables querying of the Monarch Initiative biomedical knowledge graph for genes, diseases, phenotypes, and their associations through natural language or direct tool calls.

Enables searching and retrieving detailed information about cell lines from the Cellosaurus knowledge resource, including disease associations, tissue origins, and genetic profiles.

An open source biomedical research agent that provides LLMs with 28 tools for drug discovery, protein analysis, literature search, medical imaging, omics, and sandbox execution, all running locally via Ollama and MedGemma.