"A database for genomic and biological data (Ensembl)" matching MCP servers:

Enables querying Ensembl genomic data including gene lookup, sequence retrieval, homology, variation, and variant effect prediction via MCP tools.

A comprehensive Model Context Protocol (MCP) server that provides access to the Ensembl REST API for genomic data, comparative genomics, and biological annotations.

Upload your raw DNA file from 23andMe, AncestryDNA, MyHeritage, FamilyTreeDNA, or any VCF -- and watch a team of AI agents fan out across 16+ public genomics databases, share discoveries with each other in real time, and produce a comprehensive health report. Everything runs on your machine. Nothing is uploaded anywhere.

Provides access to the Ensembl genomics REST API with 30+ tools for genomic data including gene lookup, sequence retrieval, genetic variants, cross-species homology, phenotypes, and regulatory features.

Enables looking up genes, fetching sequences, predicting variant consequences, finding orthologs, and cross-database xrefs via Ensembl REST API through MCP.

Exposes four CMS public datasets as callable tools in Claude conversations, enabling natural-language real-world evidence analytics without SQL expertise.

Enables secure natural language querying of a clinical SQL Server database using a local Ollama model, with strict SQL validation to protect sensitive data.

Enables searching the NIAID Data Ecosystem for biomedical research resources including datasets, clinical studies, and publications using Elasticsearch queries.

Connects AI assistants to health data via the Biological Sovereignty Protocol, with cryptographically verified user consent enforced on-chain.

Enables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).

Enables querying a synthetic patient dataset with tools to look up patients by ID, age, disease, name, and get statistics, connecting Claude Desktop to local data.

MCP server for the STRING protein–protein interaction database, hosted by STRING at mcp.string-db.org. Adapted for LLM grounding: responses are size-limited and include metadata and notes on interpretation and next steps. Tools cover identifier resolution, interaction networks and evidence, functional and PPI enrichment, and sequence similarity search.

Enables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.

Enables access to a synthetic hospital dataset through MCP, supporting SSE and STDIO transports, deployable to IBM Cloud Code Engine.

Source-provenanced US federal healthcare provider data over MCP. Resolve any NPI or CCN across NPPES, OIG LEIE, SAM.gov, state Medicaid exclusions, CMS PECOS, Care Compare, and Open Payments — every field carries a 14-field provenance contract, and an "excluded or compromised anywhere" check runs on every lookup.

Enables AI assistants to access and query ARTPARK's public health datasets including dengue epidemiology, livestock census, and FMD vaccination data through a structured 4-step workflow for data discovery and retrieval.

Enables scenario-based clinical communication practice through MCP tools for discovering scenarios, starting sessions, sending practitioner turns, and receiving evidence-linked evaluation feedback.

Enables LLM agents to query de-identified FHIR-shaped hospital data through audited, read-only tools for patients, encounters, conditions, observations, medications, and interaction checks, while any medication write stays a draft that a clinician must confirm out-of-band.

Public read-only MCP server providing structured access to Atlarium habitat data and advisory functions for aquariums, terrariums, and related systems.

A remote MCP server that lets an LLM explore, query, aggregate, and benchmark the ~234 datasets in the CMS Provider Data Catalog — hospitals, dialysis facilities, nursing homes, home health, hospice, physicians, and more — in plain language.