A
license-
qualityC
maintenanceEnables querying the gnomAD genome aggregation database for variant, gene, and region information.
Last updated
15
MIT
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"Information about Obsidian (volcanic glass or note-taking app)" matching MCP servers:
- Alicense-qualityCmaintenanceAllows to retrieve information about an AnnData object via MCP using the read_lazy function from anndata.Last updated7MIT
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WormBase MCP Serverofficial
AlicenseAqualityDmaintenanceEnables querying the WormBase database for C. elegans and nematode genomics data, including gene information, protein sequences, phenotypes, interactions, and expression patterns through natural language.Last updated121MIT- AlicenseAqualityDmaintenanceEnables AI-driven pharmacogenomic analysis by querying structured genetic variant, drug response, and disease risk data. Supports natural language questions about medications, traits, and health risks based on user genome data, with privacy-first local execution.Last updated169010MIT
- AlicenseAqualityDmaintenanceA Model Context Protocol server providing LLMs with access to the Ensembl genomics database, enabling AI assistants to query gene information, sequences, variants, and other genomic data across multiple species.Last updated108JavaScriptMIT
- AlicenseBqualityCmaintenanceProvides a programmatic interface to the Genome Aggregation Database (gnomAD) API across versions v2.1.1, v3.1.2, and v4.1.0. It enables users to query gene metadata, variant information, population frequencies, and ClinVar data through a unified schema.Last updated125Apache 2.0
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- AlicenseBqualityDmaintenanceEnables comprehensive access to PubChem's chemical database with over 110 million compounds. Supports chemical searches, structure analysis, bioactivity data, safety information, and molecular property calculations through 30 specialized tools.Last updated30MIT
- FlicenseBqualityDmaintenanceEnables AI assistants to query genetic variant data, gene constraints, and population genetics information from the gnomAD (Genome Aggregation Database) through its GraphQL API. Supports searching for genes and variants, retrieving constraint scores, analyzing population frequencies, and accessing genomic coverage data.Last updated910
- AlicenseCqualityDmaintenanceA server that enables AI assistants to interact with cancer genomics data from cBioPortal, allowing users to explore cancer studies, access genomic data, and retrieve mutations and clinical information.Last updated175MIT
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- Alicense-qualityCmaintenanceEnables querying of the Monarch Initiative biomedical knowledge graph for genes, diseases, phenotypes, and their associations through natural language or direct tool calls.Last updated15MIT
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- Alicense-qualityDmaintenanceSearches UniProt by protein name to find accession numbers and retrieves detailed protein structure information from AlphaFold, including direct links to 3D structural predictions.Last updated3MIT
- Alicense-qualityDmaintenanceA unified MCP server for biomedical research that connects AI systems to resources like Ensembl, EuropePMC, STRING, and more, enabling retrieval of verified domain-specific information.Last updatedApache 2.0
