A
licenseB
qualityD
maintenanceProvides seamless access to UniProtKB protein database, enabling queries for protein entries, sequences, Gene Ontology annotations, full-text search, and ID mapping across 200+ database types.
Last updated
5
2
MIT
mcp-interpro
by pipeworx-io
Click on "Install Server".
Wait a few minutes for the server to deploy. Once ready, it will show a "Started" state.
In the chat, type
@followed by the MCP server name and your instructions, e.g., "@mcp-interproFind domains for protein P12345"
That's it! The server will respond to your query, and you can continue using it as needed.
Here is a step-by-step guide with screenshots.
mcp-interpro
InterPro MCP (EBI) — protein family / domain / functional-site classification.
Part of Pipeworx — an MCP gateway connecting AI agents to 808+ live data sources.
Tools
Tool | Description |
Related MCP server: STRING-MCP
Quick Start
Add to your MCP client (Claude Desktop, Cursor, Windsurf, etc.):
{
"mcpServers": {
"interpro": {
"url": "https://gateway.pipeworx.io/interpro/mcp"
}
}
}Or connect to the full Pipeworx gateway for access to all 808+ data sources:
{
"mcpServers": {
"pipeworx": {
"url": "https://gateway.pipeworx.io/mcp"
}
}
}Using with ask_pipeworx
Instead of calling tools directly, you can ask questions in plain English:
ask_pipeworx({ question: "your question about Interpro data" })The gateway picks the right tool and fills the arguments automatically.
More
License
MIT
This server cannot be installed
Maintenance
–Maintainers
–Response time
–Release cycle
–Releases (12mo)
Commit activity
Resources
Unclaimed servers have limited discoverability.
Looking for Admin?
If you are the server author, to access and configure the admin panel.
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Related MCP Connectors
UniProt MCP — protein sequence + function database.
STRING protein-protein interaction networks across ~12k organisms
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
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